Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1792 ATGAAAGAACTGAGCGACAACCAGAAACAAGGAGAAGAACATTCTCTCTTCCATTTTCACTATCTAATATTAAATTATAAATTAATAATAATAATAATAATGCGTAAGGTTACCTTCTCATCTCGCCGCCATGTCTCCCGCCGCCGCCACAGGAAGCCGACGTGGCCACTTCAGTCTCCGGCTTCGCCGCAGCAATCGATAAATGGTTCACCGGGCGAGAGGCCGGAGAATGGATTGAAGGCGAAGAAGATGGCCGGAGCAGCGAGGTTGTGGATGCGGGTTGATCAGGAGGGGCAGACGGAGATGGTGGAATGGGATAAGTACACGATTATCCTCCATGCTTCGATTCCTGCTAGGGATTTGAGGATTTTGGGACCTGTCTACTCTCACTCCTCTAATATACTTGGCAGAGAGAGAGCAATAGTAGTTAATTTGGAGTTTATTAAGGCTATAATCACAGCTGAAGAAGTGTTATTGCTTGAGCCTCTTCGCCAAGAAGTGATTCCATTTGTTGAACAACTCAGACAACAACTTCCATATAAAACTACTCAACCTAAGCTTCATGGAACTGCATATGAAAAAGAAATTGAAATGCAGGTTTCTAATGAAATACAATGGTTATCTTCTCCACAGTTAGCTGAAGATTTGCCAGATGAGCTTCCCTTTGAGTTTCAAGTTTTGGAGATTGCTTTGGAATTTGTTTCTACTCTTTTGGACTCAAATGTGGCAGAACTTGAAAGTGATGCTTACCCTGTACTAGATGAATTGGCTAAGAATGTTAGCACCAACAATCTTGACTTTGTTCGGAGTTTGAAGAGTAACCTTACACGTTTGCTGGCACGTGTACAAAAGGTGCGGGATGAAATTGAACATTTGTTAGATGGCAATGAAGATATGAGTCAATTATATTTGACCAGGAAGGGGTTGCAGAATCATCAATTTGAGGCCCATTCTACCAAAAGTGAAAGTCTTGTGACTAAACATGATGATAATGACGTGGAGGAACTGGAGATGTTGCTTGAGGCATATTTTATGCAGTTGGATGCTACTCGTAACAAGATACTCTCTGTTAGGGAATATATTGATGATACAGAAGACTATGTGAACATCCAACTTGATAACCAAAGAAATGAGCTTATTCAGCTGCAGTTGACACTGACAATTGCATCATTTGCAATGGGTATTGAAAATTATGTTGCTGGTATGCTTGGCATGAACATCAAAATTCAATTATATGAAGTGCAAAATTTATTTTGGCCCTTTGTTGGGATCATGACCACAGCTTGCATACTCCTTTTCCTGATTATTTGGGCATATGCAAAATGGAAAAAGTTGTTGGGATCTTAA 1347 0.4068 MKELSDNQKQGEEHSLFHFHYLILNYKLIIIIIMRKVTFSSRRHVSRRRHRKPTWPLQSPASPQQSINGSPGERPENGLKAKKMAGAARLWMRVDQEGQTEMVEWDKYTIILHASIPARDLRILGPVYSHSSNILGRERAIVVNLEFIKAIITAEEVLLLEPLRQEVIPFVEQLRQQLPYKTTQPKLHGTAYEKEIEMQVSNEIQWLSSPQLAEDLPDELPFEFQVLEIALEFVSTLLDSNVAELESDAYPVLDELAKNVSTNNLDFVRSLKSNLTRLLARVQKVRDEIEHLLDGNEDMSQLYLTRKGLQNHQFEAHSTKSESLVTKHDDNDVEELEMLLEAYFMQLDATRNKILSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFAMGIENYVAGMLGMNIKIQLYEVQNLFWPFVGIMTTACILLFLIIWAYAKWKKLLGS* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1792 448 Coils Coil 268 288 - -
Lan1g1792 448 PANTHER MAGNESIUM TRANSPORTER MRS2-4-RELATED 41 448 - -
Lan1g1792 448 Coils Coil 333 353 - -
Lan1g1792 448 Gene3D Magnesium transport protein CorA, transmembrane region 163 379 - -
Lan1g1792 448 MobiDBLite consensus disorder prediction 43 78 - -
Lan1g1792 448 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 41 448 IPR039204 -
Lan1g1792 448 MobiDBLite consensus disorder prediction 57 72 - -
Lan1g1792 448 CDD Mrs2_Mfm1p-like 91 445 IPR039204 -
Lan1g1792 448 Gene3D - 79 162 - -
Lan1g1792 448 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 384 437 IPR045863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1792 Lan-Chr1 32622835 32627955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1792 80 448 MRS2 Gene Family AT3G58970 62.595 6.48e-165 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1792 K16075 - gmx:100812561 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0567 12 12439344 12443692 Lan1g1792 1 32622835 32627955 LSH
Lan1g1792 1 32622835 32627955 Lan15g0041 15 256749 259240 PCT
Lan1g1792 1 32622835 32627955 Lan14g0215 14 2485848 2488307 PCT