Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1770 ATGGCGACTCCACGACTCGAACACTTGACATTGCAGGCCAAGCGCATGCCGGGGAACAATTATAACTGCACTCCTCTAACACCAAGGTCTAGATTGGAAAGGCTTTTGAGGGAAAGAGAGTTAAGGAAATCAAGCAGGTATGTTCAGCCGACCGAGGAAGGAAACAACAAAGAGGGAGACCAATTTTTGAATGATGTGGAACAATTTTGTAACGAAGAAGACCTCTCGGATACTTCGAGAGCATTTACGGAGGAGCAGCCATTCAGACAACGTTTGTTGGTGGTAGCTAATAGGTTGCCTGTGTCTGCTGTTAGGGAGGGTGTGGATTCATATCACCTTGAGATAAGTGTTGGAGGGTTAGTTAGTGCACTTTTAGGTGTAAAGGAGTTTGATACCAGATGGATTGGGTGGCCTGGTGTGAATGTGAATGATGATGCTGGCCAAGAAGCTTTGACTAAAGCTCTAGCTGAAATGAGATGTGTACCAGTATTTCTTGATGAGGACATAGTTAATCAGTACTATAATGGTTACTGCAACAACATATTATGGCCTCTTTTTCATTACCTCGGGCTTCCACACGAAGACAGGCTTGCCACGACACGCAGTTTTCAATCTCAATTTGATGCATATAAGAAAGCAAACCAAATGTTTGCTGATGTAGTCAATAAGTATTATGAAGAAGGAGATATTGTTTGGTGCCATGATTACCACCTTATGTTTCTTCCAAAATGTTTGAAAGAATACAATAGTAATATGAAAGTTGGCTGGTTTCTCCATACACCTTTTCCGTCCTCGGAATTACATAGGACTCTTCCGTCTAGATCAGAGCTTTTGAGAGCTGTACTTGCTGCTGATTTGGTGGGATTCCATACTTACGATTACGCAAGGCATTTTGTGAGTGCTTGTACTCGCATTCTTGGGCTTGAAGGTACACCAGATGGAGTAGAAGATCAAGGGAAGCTAACTCGTGTGGCTGCGTTTCCTATTGGCATTGATTCTGAACGATTTATCCGAGCTCTTGAACTCCCTGAAGTCCAGGATCGCATGAAAGAAATGCAAGAAAGATTTGCAGGCCGAAAGGTAATGTTGGGCATCGATCGTCTTGATATGATTAAAGGAATTCCGCAGAAAATATTGGCATTTGAACAGTTCCTTGAGGAGAATCCACACTGGCATGATAAAGTTGTCTTGCTTCAAATTGCTGTACCTACAAGGACAGATTGTCCTGAATATCAAAAGCTTACCAGTCAGGTGCACGAGATTGTGGGACGCATCAATGGAAGATTTGGAACACTTACTGCTGTCCCAATACACCATCTGGATCGATCACTTGACTTTCATGCATTATGTGCACTCTATGCTGTTACTGATGTAGCACTTGTAACATCTTTAAGGGATGGCATGAACCTTGTCAGCTATGAATTTGTTGCTTGTCAAGCTTCTAAGAAGGGAGTTCTTATTTTAAGCGAGTTTGCAGGTGCTGCACAGTCTCTTGGTGCTGGTGCTCTCTTGGTAAATCCATGGAACATTACAGAGGTTGCTGCTTCTATTGGTTATGCTTTGGACATGCCAGCTGATGAAAGAGAAAAACGGCATCAGTTTAACTTCAAGCATGTCACAACTCACACATCACAAGAATGGGCTGCAACTTTTGTCAGTGAACTGAATGATACCATTGTTGAAGCTCAGCTTAGGACAAAACAAGTTCCACCAGTGCTTCCTAACGATGTGGCAGTTGATTGTTACTCCAAAGCCAATAACAGATTAATTATATTGGGTTTCAATGCCACTTTGACTGAACAAGTGGATGCCCTTGGAAGAGGTGGTCAAATTAGGGAACTGGAACTTCAATTGCATCCAAATCTGAAGGAACATTTAAAGAAGTTATCTGATGATCCAAAGACAACACTTGTGGTTCTGAGTGGGAGTGCTAGAGATGTCATGGACAAAAACTTCAGTGAATACAATATGTGGTTAGCAGCAGAAAATGGAATGTTTTTAAGACTTACTACTGGTGAATGGATGACAACAATGCCTGAAAATTTAACCATGGATTGGGTTGATAGTGTGAAGCACGTTTTTGAGTATTTTACTGAGAGAACACCAAGGTCTCATTTTGAGGTTCGTGAAACTTCAGTAATATGGAATTACAAGTATGCAGATGTTGAGTTTGGAAGGCTTCAAGCAAGAGATCTACTTCAGCATCTTTGGACAGGTCCAATATCAAATGCATCTCTTGATGTTGTCCAAGGTGCTAGATCAGTTGAGGTCCGGGCAGTTGGTGTCTCAAAGGGAGCAGCCATTGATCGAATTTTGGGAGAGATAGTTCATCACAAAGGCATGAAGGCACCAATTGATTATGTCCTATGCATTGGGCACTTTCTAGCAAAGGATGAAGATGTTTATAAATTTTTTGAGCCTGAGCTTCCATCTGAATCATTACCAACAGCAGGAGCTCTTCTATCCACTTCTCAGAGACCATCATCCCTACCAAAATCTTCATCCAGCCGAGTTGCATCCGGGTCTAAGGCGTTTCGTTATAAGAAGCAACGATCGTTGTCAATCATAGAAAGAAGAGAAATTGAGTTTGCTAGTGGAGATCCTTGGAGGCCTTGGAGACCAAGTGATAGAATATCACTGCATGAGGGTTCTTCAGTGCTTGATCTTAAAAGTGACAATTACTTCTCTTGTGCTGTTGCAAGAAAGAGATCAAGTGCAAGATACCTTCTTAAAACCTCAGATGATGTTGTGGATCTCTTAAGTGACCTTGCAGATCATTCATCATTGCCATCAACTTGA 2799 0.4194 MATPRLEHLTLQAKRMPGNNYNCTPLTPRSRLERLLRERELRKSSRYVQPTEEGNNKEGDQFLNDVEQFCNEEDLSDTSRAFTEEQPFRQRLLVVANRLPVSAVREGVDSYHLEISVGGLVSALLGVKEFDTRWIGWPGVNVNDDAGQEALTKALAEMRCVPVFLDEDIVNQYYNGYCNNILWPLFHYLGLPHEDRLATTRSFQSQFDAYKKANQMFADVVNKYYEEGDIVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSELHRTLPSRSELLRAVLAADLVGFHTYDYARHFVSACTRILGLEGTPDGVEDQGKLTRVAAFPIGIDSERFIRALELPEVQDRMKEMQERFAGRKVMLGIDRLDMIKGIPQKILAFEQFLEENPHWHDKVVLLQIAVPTRTDCPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGALLVNPWNITEVAASIGYALDMPADEREKRHQFNFKHVTTHTSQEWAATFVSELNDTIVEAQLRTKQVPPVLPNDVAVDCYSKANNRLIILGFNATLTEQVDALGRGGQIRELELQLHPNLKEHLKKLSDDPKTTLVVLSGSARDVMDKNFSEYNMWLAAENGMFLRLTTGEWMTTMPENLTMDWVDSVKHVFEYFTERTPRSHFEVRETSVIWNYKYADVEFGRLQARDLLQHLWTGPISNASLDVVQGARSVEVRAVGVSKGAAIDRILGEIVHHKGMKAPIDYVLCIGHFLAKDEDVYKFFEPELPSESLPTAGALLSTSQRPSSLPKSSSSRVASGSKAFRYKKQRSLSIIERREIEFASGDPWRPWRPSDRISLHEGSSVLDLKSDNYFSCAVARKRSSARYLLKTSDDVVDLLSDLADHSSLPST* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1770 932 CDD GT20_TPS 91 556 IPR001830 GO:0003824|GO:0005992
Lan1g1770 932 Gene3D Glycogen Phosphorylase B; 338 540 - -
Lan1g1770 932 Gene3D - 616 774 IPR023214 -
Lan1g1770 932 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 81 923 - -
Lan1g1770 932 Gene3D Glycogen Phosphorylase B; 82 337 - -
Lan1g1770 932 Pfam Glycosyltransferase family 20 91 556 IPR001830 GO:0003824|GO:0005992
Lan1g1770 932 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 81 923 IPR001830 GO:0003824|GO:0005992
Lan1g1770 932 Gene3D - 680 760 - -
Lan1g1770 932 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 90 559 - -
Lan1g1770 932 SUPERFAMILY HAD-like 588 793 IPR036412 -
Lan1g1770 932 CDD HAD_TPP 589 808 - -
Lan1g1770 932 Pfam Trehalose-phosphatase 616 816 IPR003337 GO:0003824|GO:0005992
Lan1g1770 932 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 91 556 IPR012766 GO:0003825|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1770 Lan-Chr1 32316645 32328005 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1770 16 930 Trehalose Biosynthesis Gene Families AT1G78580 73.523 0.0 1377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1770 K16055 - gmx:100816642 1484.93