Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1767 ATGATGCTATCTAGTTCCTTCTTTGCTTTTTTAATCATTGCTTTTAGTTGTTTCAGTTGCTTCAGATATGCTGAATCTAAACTACCACAACAAGAGGTTGATGCTCTTCAAGAAATCACTAGCATGATGGGTGCCACATATTGGAAGTTTGATAGTGATTCTTGTGAAATTCAAATGGTGGGGTTAACACCAGAGCCACCCAATGAATCTGAGAGCATCATTCGTTGTGATTGCTCTTCTGAAAATGACTCCTTCTGTCATGTAGTAAGCATTATGCTCAAGGGGTACAACCTTCCGGGCTTGCTTCCACCTCAACTGGTTAACCTTCCATACATCAGAGAAGTTGATTTTGCCTTGAACTACCTATACGGTACGATTCCAAAGGAATGGGCTTCATTGAATCTAACTTCAATCTCTGTACTTGTCAATCGTTTATCGGGGGAAATTCCTAAGGAGTTGGGAAATATTACCAATCTAATATACCTGAACCTTGAAGCAAACCAATTTTCTGGCCCTGTCCCTTCTCAACTTGGAAGTTTATCGAACCTGCAGACTTTGATTTTATCATCCAATAAATTGTCTGGGAACATACCAGCGACATTTTCTCAGTTACAGAATTTGATAGATTTTAGGATAAACGATAACAGTTTAAACGGAAAAATACCTAGCTTCATACAGAATTGGAAACTACTTCAAAGACTAGAAATGCATGCAAGTGGATTGGAGGGACCTATCCCATCAAATATATCTTTGTTAAGTAATTTAACTCAACTGAGGATCAGTGATATAAATGGCCCAAGTCAGACTTTTCCTATTTTAAACAACATGAAAGGCATGATAAGATTGATTTTGAGAAGCTGCAATATTACTGGAAAGCTTCCAAGCTACATGTGGACAATGAACAAATTGGAAATGTTTGATGTAAGCTTTAATAATTTGGTTGGGGAAATTCCTGCAACTTCTATTGAGGGGCATCTGAGATTTCTCTTCCTGACTGGCAACATGCTAAGCGGTAATGTACCTGATTCAATCTTGATAGCTGGAAGCAATGTTGATCTTTCTTACAACAACTTTTCCTGGCAAGGACCCGAGCAATCGACTTGTCAAGATAACCTGAATTTAAATCTAAACTTGTTTAGGAGCACCTCAGGGGTCAATGGATCACAAGGTGTTCTTCCATGTTCAAAGACTTTCAACTGTCCAAGATATTCAACTTGTTTGCATGTTAATAGTGGTGGAAAGGATGTAACGGTGATGGAAAATGATAAAAACATCCTCTACATAGGAGATGGAGGCGTGTTAGGCGGTGCTGCTAACTATTTTAACGATAACAAAAATCATTGGGGGTTAAGTAGCACAGGGGACTTCATGGATGATTCTGATTTCCAAAATACACGTTACACCAAGTTTTTGACATCTTCAAATATGTCTGAATTATATGAAACTGCTCGCGTGGCCCCACTTTCGCTTACATATTTTCACTATTGCTTGGAAAATGGGAAATATACTGTGTATCTCCACTTCGCGGAGATACAATTTACAAATGATAAGACATATAAAAGTCTCGGGAAGCGCCTATTTGATATCTATGTTCAGGAAAAGTTAGTTTGGAAGGATTTTAATATTGAAGATGAAGGCCATGCTGCTCAAACACCGCATACAATATCAATATACAATGTCAGTGTAACGGACAATGTTCTGGAGATTCGATTCTACTGGGCTAGCAAGGGTACTACGAGGATTCCTAGAAGTGGAGTTTATGGTCCCCTCATATCAGGTTTCTCTATTGTTTCTGATTCTAAACCTTGTTCAGACCGAAAAACTGGAAAACATAGTAAAGCTGTTGGAGTTGGGCTTGGAGTTGCAGCTTTATTCCTAGTGCTTATTATAGTGGGAGTGTTTTGGTGGAAAGGCTGCTTCAAAGGAATTATGAAGAGAGAAAAAGGTATTGAAGGACAAGATTCTATGACAGGGACATATACTTTAAAACAAATTAGAGATGCCACAGATGACTTCAATCCTACTAACAAGATCGGGGAAGGCGGTTTTGGTCCTGTCTACAAGGGTCAATTATCTGACGGTACTTGGATAGCAGTCAAACAGCTCTCGTCAAAGTCTCAGCAGGGAAACCGTGAATTTCTAAACGAGATAGGGATGATATCCTGTTTGCAACACCCAAATCTTGTGAAACTTCATGGATGTTGCATTCAAAGTGATCAACTAATGTTGGTTTACGAGTACATGGAACATAACAGCCTGGCCCGCGCTTTATTCAGCTCTAAGTATCAGCTTAAACTTGATTGGCCAACAAGGCTTAGGATCTGTATTGGAATAGCAAAGGGTCTTGCATTTCTTCATGAAGAATCAAGGCTCAAGATTGTTCATCGAGATATCAAAGCTACTAACGTGTTACTGGACGGGAATCTAAACCCTAAAATATCTGACTTTGGGTTGGCTAAGCTTGATGAAGAAGAGAAGACCCATATCAGCACCAGAGTGGCTGGCACTATGGGGTATATGGCACCGGAATATGCGTTATGGGGTTACTTGACGTACAAGGCTGATGTCTACAGTTATGGAGTTTTGGTGTTAGAAGTTGTTAGTGGGCAGAATAATAATGATTACATGCCAAGTGATAATTGTGTTTGTCTTTTAGAGAAGGTATGTCGTCTGCAACACACTGCAAACTTAATGAAACTGGTTGATGAAAGGTTGGGATCAGAGTTCAATCCAACCGAAGCAGAAAATATGATGAAAGTGGCACTCCTGTGTACTAATACATCGCCATCGCTTAGGCCTACAATGTCTGGGGTTGTGAACATGCTTGAAGGAAGAATAACCATTCCAGATGTTATCCAAGAATCGGGTAGTTTCAGTGAAGATTTAAGGTTTAAAGCTATGAGGGACATTCGTCAACATAGGGAAAGTCACAGTTTGAGCACAAGCCGAACCGACAATTCAACGGGCGCCCGTACACTTAGCTCTCCTTCTACATATGGCAATGACATACATGAGATATCCTCAGAATTATGA 3033 0.3976 MMLSSSFFAFLIIAFSCFSCFRYAESKLPQQEVDALQEITSMMGATYWKFDSDSCEIQMVGLTPEPPNESESIIRCDCSSENDSFCHVVSIMLKGYNLPGLLPPQLVNLPYIREVDFALNYLYGTIPKEWASLNLTSISVLVNRLSGEIPKELGNITNLIYLNLEANQFSGPVPSQLGSLSNLQTLILSSNKLSGNIPATFSQLQNLIDFRINDNSLNGKIPSFIQNWKLLQRLEMHASGLEGPIPSNISLLSNLTQLRISDINGPSQTFPILNNMKGMIRLILRSCNITGKLPSYMWTMNKLEMFDVSFNNLVGEIPATSIEGHLRFLFLTGNMLSGNVPDSILIAGSNVDLSYNNFSWQGPEQSTCQDNLNLNLNLFRSTSGVNGSQGVLPCSKTFNCPRYSTCLHVNSGGKDVTVMENDKNILYIGDGGVLGGAANYFNDNKNHWGLSSTGDFMDDSDFQNTRYTKFLTSSNMSELYETARVAPLSLTYFHYCLENGKYTVYLHFAEIQFTNDKTYKSLGKRLFDIYVQEKLVWKDFNIEDEGHAAQTPHTISIYNVSVTDNVLEIRFYWASKGTTRIPRSGVYGPLISGFSIVSDSKPCSDRKTGKHSKAVGVGLGVAALFLVLIIVGVFWWKGCFKGIMKREKGIEGQDSMTGTYTLKQIRDATDDFNPTNKIGEGGFGPVYKGQLSDGTWIAVKQLSSKSQQGNREFLNEIGMISCLQHPNLVKLHGCCIQSDQLMLVYEYMEHNSLARALFSSKYQLKLDWPTRLRICIGIAKGLAFLHEESRLKIVHRDIKATNVLLDGNLNPKISDFGLAKLDEEEKTHISTRVAGTMGYMAPEYALWGYLTYKADVYSYGVLVLEVVSGQNNNDYMPSDNCVCLLEKVCRLQHTANLMKLVDERLGSEFNPTEAENMMKVALLCTNTSPSLRPTMSGVVNMLEGRITIPDVIQESGSFSEDLRFKAMRDIRQHRESHSLSTSRTDNSTGARTLSSPSTYGNDIHEISSEL* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1767 1010 Gene3D Ribonuclease Inhibitor 268 376 IPR032675 -
Lan1g1767 1010 Gene3D Ribonuclease Inhibitor 192 267 IPR032675 -
Lan1g1767 1010 SMART serkin_6 672 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1767 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672|GO:0006468
Lan1g1767 1010 MobiDBLite consensus disorder prediction 973 1010 - -
Lan1g1767 1010 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 69 986 - -
Lan1g1767 1010 SUPERFAMILY Protein kinase-like (PK-like) 657 943 IPR011009 -
Lan1g1767 1010 SUPERFAMILY L domain-like 61 342 - -
Lan1g1767 1010 Pfam Protein tyrosine and serine/threonine kinase 675 942 IPR001245 GO:0004672|GO:0006468
Lan1g1767 1010 CDD STKc_IRAK 678 944 - -
Lan1g1767 1010 Pfam Malectin domain 406 593 IPR021720 -
Lan1g1767 1010 ProSiteProfiles Protein kinase domain profile. 672 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1767 1010 Gene3D - 403 601 - -
Lan1g1767 1010 Gene3D Transferase(Phosphotransferase) domain 1 748 953 - -
Lan1g1767 1010 Gene3D Phosphorylase Kinase; domain 1 642 747 - -
Lan1g1767 1010 PANTHER RECEPTOR-LIKE KINASE IN FLOWERS 1-RELATED 69 986 - -
Lan1g1767 1010 MobiDBLite consensus disorder prediction 981 1010 - -
Lan1g1767 1010 Gene3D Ribonuclease Inhibitor 30 191 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1767 Lan-Chr1 32287155 32298393 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1767 8 837 Receptor kinase-like Gene Family AT1G29750 61.252 0.0 1049
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan1g1767 PK_Tyr_Ser-Thr 2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1767 - - vra:106779815 1422.91