Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1756 ATGAAAACTTGTGATGAATGGAAACCTTTTCTAGTAATGATAGCAATTGCTTTTGCTCTCACTATAGTCAACATTCTTCTCAAGAAAGTCCTTGAAGAAGGGATGAACCATCTGGTTTTTATCACATACCGCCTTTCAATTTCTTCCATTTTCTTAGCTCCAATGAGTTACTTTTGGGAAAGAAATGGAAGACCAAAGCTCACATTCCGAATTTGTTGTTACCTTTTCTTCAGTGCCATTGTTGGGGCATCAATCACACAATACTTCTTCCTTATGGGGATTCAATACACCTCTGCTACCTATGCTTGTGCCTTTGTAAATATGGTGCCTGTGATCACATTCATTATGGCATTACCATTTCGATTAGAGACTATAAACATTAAATGCAACAGTGGGAAAGCAAAGATTCTTGGTACATTTGTGTGCATAGGAGGAGCATTGTTGTTGACATTTTACAAAGGGAAACCATTGTTTAATAATTATTCTCACTATGAGTATGAAGCTCCAGCTTCTCCAGCTACTAAATCAACAGAAAAATGGACCATTGGTGTAATCACTTTGATTCTGGGAACCCTCTTTATATCTTCATGGTATATTTTACAATCAAATATAGTCAAGAGATACCCATGCCAGTATTCTAGCACAGCCATCATGAACTTTTTTGGAGCCATTCAATCAGCTATCCTTGGCTTTTCCATTGACAAGAAGTTGTCCATGTGGGTTATCAAGGGAAAGATACAAATAATCACAATTCTGTACTCTGGTATAGTTGGATCAGGTTTGTGCTTTGTAGGCATGTCATGGTGTGTTAAGAAGAGGGGTCCTGTCTTTGCTGCAGCATTTAGTCCTATTGTTCAGATATTGTCAGCCATGATTGACATCCCAATCTTGCATGAGCAGCTCTATCTTGGAAGTGTGATAGGGTCCGTGTTGGTGATGATTGGATTATACATTCTTCTTTGGGGTAAGAGCAAGGATATGCAGAATGTTGAAGAAATGAAGGAACAAGAGCCTCATCAAATACAACATATTACTGTTTCATGTGATTCACGGAGTCATTGA 1062 0.3823 MKTCDEWKPFLVMIAIAFALTIVNILLKKVLEEGMNHLVFITYRLSISSIFLAPMSYFWERNGRPKLTFRICCYLFFSAIVGASITQYFFLMGIQYTSATYACAFVNMVPVITFIMALPFRLETINIKCNSGKAKILGTFVCIGGALLLTFYKGKPLFNNYSHYEYEAPASPATKSTEKWTIGVITLILGTLFISSWYILQSNIVKRYPCQYSSTAIMNFFGAIQSAILGFSIDKKLSMWVIKGKIQIITILYSGIVGSGLCFVGMSWCVKKRGPVFAAAFSPIVQILSAMIDIPILHEQLYLGSVIGSVLVMIGLYILLWGKSKDMQNVEEMKEQEPHQIQHITVSCDSRSH* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1756 353 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020|GO:0016021
Lan1g1756 353 Pfam EamA-like transporter family 10 150 IPR000620 GO:0016020|GO:0016021
Lan1g1756 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 325 - -
Lan1g1756 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
Lan1g1756 353 PANTHER WAT1-RELATED PROTEIN 9 335 IPR030184 GO:0016021|GO:0022857
Lan1g1756 353 PANTHER WAT1-RELATED PROTEIN 9 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1756 Lan-Chr1 31937269 31939772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1756 1 328 Nodulin-like Gene Family AT1G11460 42.553 1.24e-95 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1756 - - gmx:100803670 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1756 1 31937269 31939772 Lan4g0304 4 5058280 5061847 PCT
Lan4g0304 4 5058280 5061847 Lan1g1756 1 31937269 31939772 PCT