Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1741 ATGCATAGCATGGCTTCTTCTCCTAGTGGAGGCTATTCAGGTGGTTCAAGCTCTCTCCATAACTCTAGCCCAGGTTCTGAGGAAGATCATCAGCATCATGTCATGGATCAAAAGAAGAGGAAGAGAATGGTGTCAAATAGAGAATCAGCAAGGAGATCAAGAATGAAGAAACAGCAACACTTGGATGGTCTTATTGCACAAATAGATCAGCTCAATAAGGAGAATAACCAAATAAGGACAAGTGTTGAGATCACTACTCAGCATTACCTTAACATTGAGGCTGAAAATGCAATTATTAGGGCTCAGGTTGAAGAACTAAGCAACAGGTTGCAATCTCTTAATGAAATCATAGATTACATAAACTCACCATGTAATTACATCTTTGATGAAGTTGTTGATCAGGATACTTTGTTTAATGATTGTGGCTTCATGATGGACCCTTGGAACTTTGTGCCTGTTAATCAACCAATCATGGCCTCTGCTGACATGTTGATGTATTGA 501 0.3932 MHSMASSPSGGYSGGSSSLHNSSPGSEEDHQHHVMDQKKRKRMVSNRESARRSRMKKQQHLDGLIAQIDQLNKENNQIRTSVEITTQHYLNIEAENAIIRAQVEELSNRLQSLNEIIDYINSPCNYIFDEVVDQDTLFNDCGFMMDPWNFVPVNQPIMASADMLMY* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1741 166 PANTHER BZIP TRANSCRIPTION FACTOR 44 4 165 - -
Lan1g1741 166 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 41 56 IPR004827 GO:0003700|GO:0006355
Lan1g1741 166 SUPERFAMILY Leucine zipper domain 38 92 IPR046347 GO:0003700|GO:0006355
Lan1g1741 166 MobiDBLite consensus disorder prediction 1 24 - -
Lan1g1741 166 Pfam bZIP transcription factor 38 91 IPR004827 GO:0003700|GO:0006355
Lan1g1741 166 Coils Coil 54 81 - -
Lan1g1741 166 Gene3D - 36 91 - -
Lan1g1741 166 MobiDBLite consensus disorder prediction 1 59 - -
Lan1g1741 166 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 36 99 IPR004827 GO:0003700|GO:0006355
Lan1g1741 166 Coils Coil 89 116 - -
Lan1g1741 166 CDD bZIP_plant_GBF1 39 89 IPR045314 GO:0003700|GO:0006355
Lan1g1741 166 SMART brlzneu 34 98 IPR004827 GO:0003700|GO:0006355
Lan1g1741 166 PANTHER BZIP TRANSCRIPTION FACTOR BZIP124 4 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1741 Lan-Chr1 31737313 31738784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1741 31 166 bZIP Transcription Factor Family AT4G34590 52.143 5.97e-42 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan1g1741 bZIP_1 8.7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1741 K25786 - jre:108993508 171.014
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0505 12 11738096 11738820 Lan1g1741 1 31737313 31738784 LSH
Lan1g1741 1 31737313 31738784 Lan1g0557 1 7329645 7330456 LSH