Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1740 ATGTATGCACTTTATGCTTCTCTCTTTCTTCTGAATCCTGATCTAGATAGAATTAACTTGTTCTTGAAGCTGCAACAATTGGGAGATGCTGTGATAAAAGCTGAATTTTGTGGAAAAATGGCAACTTTAGTTGAGAATCCCAACAGAATTAAGGCAAAGGGGAAGCATTATTATACAATATGGCAGACATTGTTTGAGATTGATACCAAGTACGTTCCGATCAAGCCTATTGGCCGAGGATCGTACGGCGTGGTGTGCTCTTCAATCAATAGGGAGACCAATGAGAAAGTTGCAATTAAGAAGATTGGTAATATATTTGAGAATTGTATTGATTCATTGAGAACATTGAGGGAGCTGAAGCTGCTTAAACATATTCAGCATGAGAATGTGATTGCTTTGAAGGATGTTATGATGCCAATCCAGAGAACAAGTTTTAAGGATGTTTACTTGGTTTATGAACTCATGGATACTGATCTTCATCAGATTATCAAGTCCTCACAGCCACTTTCTGGTGATCATTGCAAATATTTCTTGTTTCAGCTGCTTCGGGGTCTTAAATATCTTCATTCTGCAAATATTCTTCACCGAGACTTGAAGCCGGGGAATCTGCTTGTCAATGCCAACTGTGATTTGAAGATATGTGACTTTGGACTTGCAAGAACCAACGGAGTTGATGGCCAGTTTATGACAGAGTACGTTGTTACTCGTTGGTATCGTGCTCCGGAGCTCCTACTATGTTGTGACAATTATGGAACATCGATTGATGTCTGGTCTGTAGGATGCATTTTTGCTGAGATTCTTGGTAGAAAGCCAATCTTCCCTGGAACCGAATGCCTCAACCAGCTGAAACTAATCATAAGTATTCTTGGAAGCCAGAGTGAATCCGATCTCAGTTTCATTGACAATCCAAAAGCTTGGAGGTTTATCAACTCACTTCCTTATACAAGGGGAAGGCACTTCTCTCAGCTGTATCCACAAGCAGATCCATTAGCCATAGATTTGTTGCAAAAAATGCTTGTGTTTGATCCAACTAAGAGAATCACTGTTTTAGAAGCACTCCAACACCCATATATGGCTGGCCTATATGATCCAAGGAATAATCCTCCTGCCCAGGTTCCAATCAATATCAACATAGACGAAAGTTGGGGCGAACCGGTGATTAGAGAAATGATGTGGACAGAGATGCTTCATTATCATCCTGAAGCTGCTTCTGCCATTGCGTAG 1224 0.406 MYALYASLFLLNPDLDRINLFLKLQQLGDAVIKAEFCGKMATLVENPNRIKAKGKHYYTIWQTLFEIDTKYVPIKPIGRGSYGVVCSSINRETNEKVAIKKIGNIFENCIDSLRTLRELKLLKHIQHENVIALKDVMMPIQRTSFKDVYLVYELMDTDLHQIIKSSQPLSGDHCKYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTNGVDGQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISILGSQSESDLSFIDNPKAWRFINSLPYTRGRHFSQLYPQADPLAIDLLQKMLVFDPTKRITVLEALQHPYMAGLYDPRNNPPAQVPININIDESWGEPVIREMMWTEMLHYHPEAASAIA* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1740 407 ProSitePatterns Protein kinases ATP-binding region signature. 77 101 IPR017441 GO:0005524
Lan1g1740 407 CDD STKc_TEY_MAPK 65 400 - -
Lan1g1740 407 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 38 404 - -
Lan1g1740 407 ProSitePatterns MAP kinase signature. 106 209 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lan1g1740 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Lan1g1740 407 Gene3D Transferase(Phosphotransferase) domain 1 155 379 - -
Lan1g1740 407 Pfam Protein kinase domain 72 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1740 407 SUPERFAMILY Protein kinase-like (PK-like) 63 364 IPR011009 -
Lan1g1740 407 Gene3D Phosphorylase Kinase; domain 1 58 380 - -
Lan1g1740 407 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 38 404 - -
Lan1g1740 407 SMART serkin_6 71 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1740 407 ProSiteProfiles Protein kinase domain profile. 71 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1740 Lan-Chr1 31723618 31727935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1740 40 402 MAP Kinase Gene Family AT2G18170 84.022 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lan1g1740 Pkinase 7.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1740 K20537 - gmx:100783422 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0504 12 11726380 11730824 Lan1g1740 1 31723618 31727935 LSH
Lan1g1740 1 31723618 31727935 Lan6g0772 6 7111433 7115266 LSH