Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1706 ATGACAACAACACCTGGTTTCGAATACAATATCAATGAACTGTATCGAGAAGCTCAAACAAGATGGTTGAAGCCTGCGGAAGTGATGTACATTTTACAAAATCATGAGAAGTACCAGTTCACCGAAGAGGCACCTCAACAGCCAACTAGCGGGTCCCTGTTTCTGTTTAACAAAAGAGTTCTGCGTTTCTTCCGTAGAGATGGCCATAACTGGCGGAAGAAAAGAGATGGAAGAACTGTGGGAGAAGCACATGAACGCCTTAAGGTTGGAAATGTTGAGGCCTTAAATTGTTACTACGCACATGGAGAGCAGAACCCTACTTTCCAAAGGCGGAGCTTTTGGATGTTGGATCCGGCATATGACCACATTGTTCTTGTGCATTACAGAGAAACAAGTGAGGGAAAGTCCAGTTCGGGATCTGGCACACAATCGTCACCAGGTTCCTCTTCTGCATTTACTCCAAGTCCTAGCTCATATTCTACTTACAACCCGGGGTCAACATCCATACACGGTGATTCATATGAGCCTAATCAGAGTTTCTCCAGTCCTTTATCCGTAGAAGTTACCTCTGACATATACACTGGGAACAATGGATTGGGTCAGTTAGATGGAACATATGCAGAATCAGGAACCTCAACTGAACTCAACGTTTCTCAAGCTTTGCGCCGATTGGAAGAGCAGTTAAGTTTGAATGAGGACAACATTAAAGATATTCCCTTCTACGGTGAGCATGAAACTACACTTGATTCATACCCTGAGCAAAATCAAGGGGTGGTATGCAAGCAAGAGCTATTTTATGATGGATATAATGGACAGCAAGGTGATGATGGTAAGTATTATCAGGAATCGCTACACCATAATTGCCCTGATGGAAATAAAAAAGTGTTGTCTTGGACGGAGATGCTGGAACCATCCTCATCTGCAGCCAACTTATCGCAAAAAAATGTATACATACCAGCTATAAATGGAAATTCACCATCATCGTCAAGAAGGGAACCGATTGCCAGCCAGGAAAATAGTCACTGGCTAAACTTCAACCGTAATAATGCTGAAAACTCTATTTTCTCACTCCCTCAAGGTGTTGATGGAGACAAATTTCCTCCATATTCTTCGATGGTAGGAACACAACAAAGTAATTCTGACTACTATGCCACTTTGTTTGACCAAAGCCAAATTGGCGCACCTCTGCATACAGATTCAAGCTTGACTGTAGCACAAAATCAGAAATTTACTATTAAGGAAGTCTCTCCAGAATGGGGTTATACCACTAAAACTACAAAGGTCATCATTGTTGGGTCCTTTCTCGGTCATCCCTCGGATTCTACCTGGGCTTGTATGTTTGATGATGTGGAAGTTCCGGTTCAGATAATTCAGGATGGCGTAATTCGTTGCGAAGCTCCACCTCACCTTGGTGGAAAGGTAACTCTGTGCATTACTTCTGGGAACCGAGAGTCCTGCAGCGAAGTCAGACAGTTTGAGTATCGTGACAAGAACAATTATTGCAGCCACTGTAATTCATTGGAAACAGAAGCCACTATTAGAAGTCCAGAAGAGCTTCTATTACTAGTTAGATTTGAGCAGATGCTCCTTTCGGATTCAACTGTAAAGAATGATAAGACGGAATCCGGAAGTCATCTCGTAAAACAGAAAGCTGATGATGATTCATGGAGCCAGATTATTGAAACTCTTCTAGTTGGCAGTGGAAACTCATCTAGTACTACTGATTGGCTTCTTGAAGAGCTTCTAAAGGATAAGCTTCAGATGTGGCTTTCTTGCAGATCCCATGACAGAGATGATGAGACAGGCCTTTCTCTTTCGAAGAAAGAGCAGGGCATTATTCACATGGTTGCCGGGTTGGGTTTTGAGTGGGCATTGAACCCTATTCTTAGTTGTGGCGTGAATATAAATTTCCGTGACATCAGTGGGTGGACCGCGCTTCATTGGGCTGCACGTTTCGGAAGGGAAAAAATGGTTGCTTCGCTTATAGCTTCTGGTGCATCTGCTGGAGCAGTGACAGATCCAAGTGCACGAGATCCAATCGGTAAAACTGCAGCTTCTATTGCATCCAGCCATGGGCATAAGGGACTTGCAGGGTATCTCTCAGAGGTAGCTCTAACAAGCCACCTATCATCTCTCACACTGGGAGAGAGTGAGTTATCCAGAAGTTCTGCCGAGTTTGAAGCTGATTTAAAAGTTTGTAGTGTTTCCAACGTAAATCTCACAGTCAGTGAGGATCAGGAATCACTCAAAGATACCTTGGCGGCTATCAGAAATGCAGCTCAGGCGGCTGCGCGGATACAATCTGCATTCCGTTCACATTCCTTTAGAAAACGAAGAACCAAAGAAGTTGCGGCTGGTATGGGTAGGTATGCTATCGATGCCGGTAACATTGGTAACATTCCAGAGCTTTCTGCTTTGTCAAAGCATGCCTTTCGGAATTCACGTGAATATGATTCAGCCGCCTTATCAATTCAGAAGAAATATCGAGGTTGGAAAGGCCGTAAAGATTTCTTAACATTGCGCCAAAAAGTAGTGAAGATACAGGCTCATGTGAGGGGTTACCAGGTTAGGAAGCATTGCAAGGTATTATGGGCAGTTGGAATCTTGGACAAGGTTGTGCTACGATGGCGAAGAAAAGGAGTTGGTTTACGAGGTTTCCGTCAAGATATAGAGTCAATTGATGAAAACGAAGATGAAGATATCCTCAAGGTATTCAGAAAACAAAAGGTAGACGTAGAAATCAACGAGGCTGTTTCGCGGGTTCTCTCCATGGTTGATTCTCCAAATGCCCGGCAGCAATATCATCGCATGCTTGAGAAGTTTCATCAAGCTAAGGCCGAACTCGCCAGTACGAGTGAAGAAGCATCATTATCATCTTCTATTGGTGATGTTTTCAATATGGAACAAGATGATATGTATCAATTTCCCTAG 2931 0.4347 MTTTPGFEYNINELYREAQTRWLKPAEVMYILQNHEKYQFTEEAPQQPTSGSLFLFNKRVLRFFRRDGHNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEQNPTFQRRSFWMLDPAYDHIVLVHYRETSEGKSSSGSGTQSSPGSSSAFTPSPSSYSTYNPGSTSIHGDSYEPNQSFSSPLSVEVTSDIYTGNNGLGQLDGTYAESGTSTELNVSQALRRLEEQLSLNEDNIKDIPFYGEHETTLDSYPEQNQGVVCKQELFYDGYNGQQGDDGKYYQESLHHNCPDGNKKVLSWTEMLEPSSSAANLSQKNVYIPAINGNSPSSSRREPIASQENSHWLNFNRNNAENSIFSLPQGVDGDKFPPYSSMVGTQQSNSDYYATLFDQSQIGAPLHTDSSLTVAQNQKFTIKEVSPEWGYTTKTTKVIIVGSFLGHPSDSTWACMFDDVEVPVQIIQDGVIRCEAPPHLGGKVTLCITSGNRESCSEVRQFEYRDKNNYCSHCNSLETEATIRSPEELLLLVRFEQMLLSDSTVKNDKTESGSHLVKQKADDDSWSQIIETLLVGSGNSSSTTDWLLEELLKDKLQMWLSCRSHDRDDETGLSLSKKEQGIIHMVAGLGFEWALNPILSCGVNINFRDISGWTALHWAARFGREKMVASLIASGASAGAVTDPSARDPIGKTAASIASSHGHKGLAGYLSEVALTSHLSSLTLGESELSRSSAEFEADLKVCSVSNVNLTVSEDQESLKDTLAAIRNAAQAAARIQSAFRSHSFRKRRTKEVAAGMGRYAIDAGNIGNIPELSALSKHAFRNSREYDSAALSIQKKYRGWKGRKDFLTLRQKVVKIQAHVRGYQVRKHCKVLWAVGILDKVVLRWRRKGVGLRGFRQDIESIDENEDEDILKVFRKQKVDVEINEAVSRVLSMVDSPNARQQYHRMLEKFHQAKAELASTSEEASLSSSIGDVFNMEQDDMYQFP* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1706 976 SMART iq_5 816 838 IPR000048 GO:0005515
Lan1g1706 976 SMART iq_5 839 861 IPR000048 GO:0005515
Lan1g1706 976 SMART iq_5 758 780 IPR000048 GO:0005515
Lan1g1706 976 Pfam Ankyrin repeats (3 copies) 623 701 IPR002110 GO:0005515
Lan1g1706 976 Gene3D - 529 706 IPR036770 -
Lan1g1706 976 ProSiteProfiles Ankyrin repeat profile. 641 673 IPR002110 GO:0005515
Lan1g1706 976 ProSiteProfiles CG-1 DNA-binding domain profile. 11 137 IPR005559 GO:0003677
Lan1g1706 976 Gene3D Immunoglobulins 404 500 IPR013783 -
Lan1g1706 976 MobiDBLite consensus disorder prediction 133 182 - -
Lan1g1706 976 Pfam CG-1 domain 17 130 IPR005559 GO:0003677
Lan1g1706 976 SUPERFAMILY E set domains 411 495 IPR014756 -
Lan1g1706 976 SMART CG_1_2 14 132 IPR005559 GO:0003677
Lan1g1706 976 CDD IPT 411 496 - -
Lan1g1706 976 ProSiteProfiles IQ motif profile. 817 846 IPR000048 GO:0005515
Lan1g1706 976 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 4 7 972 - -
Lan1g1706 976 Pfam IQ calmodulin-binding motif 819 837 IPR000048 GO:0005515
Lan1g1706 976 Pfam IQ calmodulin-binding motif 842 861 IPR000048 GO:0005515
Lan1g1706 976 ProSiteProfiles IQ motif profile. 759 788 IPR000048 GO:0005515
Lan1g1706 976 SUPERFAMILY Ankyrin repeat 611 702 IPR036770 -
Lan1g1706 976 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 7 972 - -
Lan1g1706 976 Pfam IPT/TIG domain 411 494 IPR002909 -
Lan1g1706 976 ProSiteProfiles Ankyrin repeat region circular profile. 641 667 - -
Lan1g1706 976 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 761 864 IPR027417 -
Lan1g1706 976 Gene3D - 817 865 - -
Lan1g1706 976 ProSiteProfiles IQ motif profile. 840 865 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1706 Lan-Chr1 30821659 30829323 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1706 7 976 CAMTA Transcription Factor Family AT1G67310 51.654 0.0 923
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Lan1g1706 CG-1 1e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1706 K21596 - gmx:100786880 1370.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0230 14 2579088 2586608 Lan1g1706 1 30821659 30829323 PCT
Lan1g1706 1 30821659 30829323 Lan14g0230 14 2579088 2586608 PCT