Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1705 ATGAATTTGCTCTATGTAGTTGGGTTTGTTCTTAAAGTGAGGCATCTACTTTTAGTGCTATGTTGCTTTCTTGTGTCTGTCCTTTTCCTCATTTGGTTCATTAGCAGGGGAACTATGGACACAAAGATGAGTTTTTTGGGTGATGGTGGTGGCAAGAAGATGTGGCTCAAATGGTGGGAGAATATCCATGGTTTCAGAATTCATCAACAGTATTATATAGGGTCCAAGAAAATGAAGAGAACTTTGTGGAAGAAGCTTTTGGTTGCATGGTTGGTTGGTTGGACCATGTTGTCTTTGTGGATCTTCTGCTGTATGAGATTACAAGCTACTGAGAAGAGGAGAGCAACTCTTGCAAGTATGTGTGATGAAAGGGCTAGGATATTTCAGGATCAGTTTAATGTGAGTATGAACCATATCCAAGCCATCTCCATTCTGATCTCAACCTTCCACCATGCCAAGAGCCCCTCGGCTATAGATCAGAGAACCTTTGCTACGTACACAGAAAGAACTGCTTTTGAAAGGCCTCTTATAAGTGGTGTTGCATATGCTGTAAGGGTGCTCCATTCTGAAAAGGAACAATTTGAGAAGCAACAAGGATGGACTATTAAGATGATGGATACTGTGGAGGAGAAACAAGTTCAAAAGGATGATTATGATCCAGAGAAATTGGAGCCCTACCCCATTCAAGAAGAATATGCTCCTGTCATCTTTGCACAGGATACACTTCCACATCTGATTTCTGTTGATGTGCTTTCTGGAAAGGAAGACCGTGAGAATGTGATGCGTGCAAGAGAATCAGGCAAAGGGGTTTTAACTGCACCCTTTAGGCTGCTCAAAACAAATCGGCTCGGGGTTATCCTGACATTTGCTGTCTATAATAGAGATCTTCCATCAAATGCAACCCCAAATGAAAGGATTCAAGCAACTAATGGGTATCTTGGTGGAGTCTTTGATGTCGAGTCACTAGTGGAGAAATTACTTCAGCAACTTGCTAGCAAGCAAACTGTAATTGTTAATGTTTATGACATTACAAATCACACCCATCACATTGCCATGTATGGTTCAAATGTTTCAGGAGATTCGTTTTATCATGCCAGCACTCTTAACTTCGGAGACCCTTTCAGGAAACATAAGATGTACTGCAGGTTCAAACAGAAACCACCATGGCCATGGTTGTCAATAACTACTTCAATTGGCATCCTTGTCATTGCACTCCTTGTTGGACATATTTTCTATGCCACTGTGAATCGATTTGCCAAAGTAGAAGATGATTGTTGTGAGATGAGGGAGCTTAAGAAGAGAGCTGAGGCAGCTGATGTAGCAAAATCCCAGTTTCTTGCCACTGTTTCCCACGAGATCAGAACACCAATGAATGGTGTTTTAGGAATGCTGCATATGCTTATGGACACAGATCTTGATGTAACTCAGCAGGAATTTGTCAGAACTGCACAAGGAAGTGGAAAAGCTCTTATGTCACTTATAAATGAGGTTTTGGATCAGGCAAAGATTGAAGCTGGTAAGCTAGAGCTTGAAGCAGTGCTCTTTGACTTACGGGCAATTTTGGATGATGTATTGGCACTGTTTTCTGAGAAGTCTCAAGAAAAAGGAGTAGAGTTGGGAGTTTATGTGTCAGATCAGGTTCCTGAGTTACTAATAGGTGATCCCGGAAGATTTCGACAAATAATTACAAATCTCATGGGTAACTCAATTAAGTTCACGGACAAAGGGCATGTTTTTGTCACGGTTCATCTCGTTGAGGAGGTTGTCCATTCAATAGAAGTTGATAAAGAATCAACCTCAGAAAATACCTTGAGTAGTTTCCCTGTAGCTGATAGTCACCGAAGCTGGGAAGGATTCAAGGCTTTCAGTCAAGAGGGGCCTCTTGGTTCTTTCTCATCTTCCTCTAATGATCCCATCAGTTTGATTATATCTGTTGAGGATACAGGTGAAGGTATTCCTCTAGAAGCTCAGCCCCGCATCTTCACTCCATTCATGCAGGTAGGTCCATCCATCTCCCGCAAACACGGAGGAACAGGAATCGGCCTAAGCATTAGCAAGTGTTTGGTTTGCCTCATGAATGGGGAAATTGGATTTGTGAGTATCCCAAAGATTGGATCCACTTTCACATTCACTACAGTCTTCGCAAATGGACTCCCTAGTTCAAATGAGTGTAAAATTCAGCAAATCATCAACCAACCTCACCTTGATTCTTCAGAATTTGAGGGTATGATTGCAATAATTATTGACCACAGACCCGTTAGAGCAAAAGTGTCCAGATATCACATTCAAAGGCTTGGCATTCATGTTGAGATGGTTTCAGATTTAGATCAAGGTTTGTCCGCTGTGACCAATGGGAACATGGTTATTAATATGGTCCTCATTGAGCAGGAGGTCTGGGACAAAGATTCAGGCATGTCATCTCACTTTGTCAATAACATAGGGAAAATTGTTCATGTGATTCCTCCAAAGATGTTCATTCTTGTTAATTCTAGTAGTTCTTCTAGAGCAAGTACTGTAACATCTGGTGTTCATAACGCCACTGCTATCACAAAACCTCTCAGAGCGAGTATGCTAGCAGCCTCACTACAACATGCTATGGGTGTTCGGAACAAGGGGACTCCTAGAAACAACGATCTCCCAAGTTTGTCTCTTCACCATCTTCTTCGTGGGAGAAGAATTCTAATTGTAGATGACAATAATGTGAACCTCATGGTAGCGGCTGCTGCTTTGAAAAAGTATGGAGCAGAAGTGGTTTGTGTCAGTAGTGGAAAAGAAGCCATCTCTTCACTGAAGCCACCACATCAATTTGATGCCTGTTTCATGGATATTCAAATGCCCGAAATGGATGGGTTTGAAGCTACAAGGATTATACGGGACATGGAACTTAGCATGAATAGTGAAGTGTCTGTGGATGACTGTGACAATGTTTCAAATTGGCATGTGCCCATTGTAGCCATGACGGCAGACGTGATCCAGGCAACACAGGATGAATGTCTAAAGTGTGGCATGGATGGATATGTTTCTAAACCATTTGAAGCTGAACAACTTTATAGAGAACTTTCATGGCTTTTCCAGTCATCTTGA 3084 0.4186 MNLLYVVGFVLKVRHLLLVLCCFLVSVLFLIWFISRGTMDTKMSFLGDGGGKKMWLKWWENIHGFRIHQQYYIGSKKMKRTLWKKLLVAWLVGWTMLSLWIFCCMRLQATEKRRATLASMCDERARIFQDQFNVSMNHIQAISILISTFHHAKSPSAIDQRTFATYTERTAFERPLISGVAYAVRVLHSEKEQFEKQQGWTIKMMDTVEEKQVQKDDYDPEKLEPYPIQEEYAPVIFAQDTLPHLISVDVLSGKEDRENVMRARESGKGVLTAPFRLLKTNRLGVILTFAVYNRDLPSNATPNERIQATNGYLGGVFDVESLVEKLLQQLASKQTVIVNVYDITNHTHHIAMYGSNVSGDSFYHASTLNFGDPFRKHKMYCRFKQKPPWPWLSITTSIGILVIALLVGHIFYATVNRFAKVEDDCCEMRELKKRAEAADVAKSQFLATVSHEIRTPMNGVLGMLHMLMDTDLDVTQQEFVRTAQGSGKALMSLINEVLDQAKIEAGKLELEAVLFDLRAILDDVLALFSEKSQEKGVELGVYVSDQVPELLIGDPGRFRQIITNLMGNSIKFTDKGHVFVTVHLVEEVVHSIEVDKESTSENTLSSFPVADSHRSWEGFKAFSQEGPLGSFSSSSNDPISLIISVEDTGEGIPLEAQPRIFTPFMQVGPSISRKHGGTGIGLSISKCLVCLMNGEIGFVSIPKIGSTFTFTTVFANGLPSSNECKIQQIINQPHLDSSEFEGMIAIIIDHRPVRAKVSRYHIQRLGIHVEMVSDLDQGLSAVTNGNMVINMVLIEQEVWDKDSGMSSHFVNNIGKIVHVIPPKMFILVNSSSSSRASTVTSGVHNATAITKPLRASMLAASLQHAMGVRNKGTPRNNDLPSLSLHHLLRGRRILIVDDNNVNLMVAAAALKKYGAEVVCVSSGKEAISSLKPPHQFDACFMDIQMPEMDGFEATRIIRDMELSMNSEVSVDDCDNVSNWHVPIVAMTADVIQATQDECLKCGMDGYVSKPFEAEQLYRELSWLFQSS* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1705 1027 CDD HATPase_EvgS-ArcB-TorS-like 558 711 - -
Lan1g1705 1027 Gene3D CHASE domain 158 387 IPR042240 -
Lan1g1705 1027 Gene3D - 505 716 IPR036890 -
Lan1g1705 1027 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 553 712 IPR003594 -
Lan1g1705 1027 ProSiteProfiles Histidine kinase domain profile. 448 716 IPR005467 -
Lan1g1705 1027 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 427 507 IPR036097 GO:0000155|GO:0007165
Lan1g1705 1027 CDD PRTases_typeI 849 920 IPR000836 -
Lan1g1705 1027 ProSiteProfiles Response regulatory domain profile. 744 866 IPR001789 GO:0000160
Lan1g1705 1027 Gene3D - 413 504 - -
Lan1g1705 1027 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 495 711 IPR036890 -
Lan1g1705 1027 ProSiteProfiles CHASE domain profile. 154 380 IPR006189 -
Lan1g1705 1027 PANTHER HISTIDINE KINASE 3 58 1026 - -
Lan1g1705 1027 SUPERFAMILY CheY-like 740 868 IPR011006 -
Lan1g1705 1027 PRINTS Bacterial sensor protein C-terminal signature 641 655 IPR004358 GO:0016310|GO:0016772
Lan1g1705 1027 PRINTS Bacterial sensor protein C-terminal signature 659 669 IPR004358 GO:0016310|GO:0016772
Lan1g1705 1027 PRINTS Bacterial sensor protein C-terminal signature 676 694 IPR004358 GO:0016310|GO:0016772
Lan1g1705 1027 SMART HKATPase_4 553 716 IPR003594 -
Lan1g1705 1027 CDD REC_hyHK_CKI1_RcsC-like 893 1020 - -
Lan1g1705 1027 SMART CHASE_2 154 355 IPR006189 -
Lan1g1705 1027 Pfam Response regulator receiver domain 893 1018 IPR001789 GO:0000160
Lan1g1705 1027 Pfam His Kinase A (phospho-acceptor) domain 441 506 IPR003661 GO:0000155|GO:0007165
Lan1g1705 1027 SMART HisKA_10 441 506 IPR003661 GO:0000155|GO:0007165
Lan1g1705 1027 SMART REC_2 891 1020 IPR001789 GO:0000160
Lan1g1705 1027 SUPERFAMILY CheY-like 888 1023 IPR011006 -
Lan1g1705 1027 PANTHER TWO-COMPONENT HISTIDINE KINASE 58 1026 - -
Lan1g1705 1027 Gene3D - 886 1026 - -
Lan1g1705 1027 Pfam CHASE domain 157 353 IPR006189 -
Lan1g1705 1027 Gene3D - 105 157 - -
Lan1g1705 1027 ProSiteProfiles Response regulatory domain profile. 892 1024 IPR001789 GO:0000160
Lan1g1705 1027 CDD HisKA 441 502 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1705 Lan-Chr1 30806801 30814422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1705 1 1026 Miscellaneous Gene Families AT1G27320 65.234 0.0 1355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan1g1705 CHASE 1.1e-35 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1705 K14489 - gmx:100801546 1625.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0462 12 10808273 10815088 Lan1g1705 1 30806801 30814422 LSH