Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1702 ATGGAAGCTAGTGCTATACTCAATAGTGGATGGTGGAACATATCAGATTACAACTACAAAGATATCTCTAGTCTTTGTAAGTGGAATGGTATTTTATGCAACCATATTGGAAGCATAACAAGAATCAATTGCCCATGTTATCTTAGGTATGAAAAAGCATTTCATCAATTTTCATCACTCAAACTTTCTGCTTTTAAAAATTTGGAGAGACTTGATCTATGGGGTTGTGGATTAGGAGGGTCAATTCCATTTGAAATTGGTAATCTCACCAAACTTACTTTTCTTGATTTGTCTAACAATTTTCTCATTGGTGAGATACCCTTTTCAATTGGAAAACTTGCAAAGATAACTACTATTGATCTCAACCATAACCTCATAAGTGGTGAAATACCACCTCAACTTGGATATTTGTCAAACCTAAAGAATTTGGATCTTAGTCACAACAATCTGTATGGAATGATTCCTCAATCTCTTGCACTTCTATACAAAAATAAATCTAAGCCCATTAATCTATTTATGTCATACAATAATTTAAAGGGTCCCATTCCACATGGGTTACCACCTTATACATTAATGGGCAACAAGGATATTTTAGCTTCTAGCAAAAAACCAATATACCAACAAGCTAAAATTCTTCCTATCATCATATGTCCAATAGCTTTATTCTTAATTATTGTGTGTGTTAAGTTGATTCACAATGCAACTAAGAAGAAGCATGCAAAGCCAATAGCAACTAAAAATGGAGATTTATTCTCTATATGGAATTATGATGGACACATAGCATATGAAGACATTATAAAAGGAACAGAAGGCTTTGACATGAAATATTGTATTGGAACAGGAGCATATGGTTGTGTTTATAAGGTACCCTTACCTAATGGCAAGGTTGTTGCCTTGAAAAAACTTCATGGTTTTATGGCTGAGGACCCAACTTCTGATGAGAGTTTTAGAAGTGAAGTAGATGTATTATCAAAAATAAAGCATAGACATATTGTGAAGCTTTTAGGGTTTTGCTTGCACAAAAGAATAAGGTTTTTGATATATGAATATATGGAAAAGGGAAGCTTGTTTAGTGTTCTATATGATGATGTTGAAGCAATAGAATTGGAATGGAGAAAAAGGGTTAACATTATTAAAGGCATTGCTCATGCTCTTTCATATCTTCATCATGATTGTATACCTCCAATTGTGCATAGAGATATATCTAGCAGTAACATCTTGCTTAACTCAGAGTGGCAGCCCAACATTTCTGACTTTGGCATTGCAAGACTCCTCAGATATGATTCTTCCAATAGAACTATAGTTGCTGGAACTTATGGCTATATTGCCCCAGAACTTGCCTACACTATGGCTGTGACTGAAAAATGTGATGTCTATAGCTTTGGTGTAGTGGCACTTGAAACATTAATGGGAAAGCATCCTCAAGAAATCTTATCATCACTTCAATCAACTTATTCTCATGAAATCACATTATGTGAAGTACTAGACCAACGTCTAGCACCCCCTACCATAGCAGTTTTATTAGAAATAATTGATGTTGCTATAGTGGCTTTTGCGTGCTTAAACAATAACCCACACTATAGGCCATCAATGAAATGTGTGTCACAAAGTTTTCTAACTCAACATACTACTTTGAATATTCCTCTATGTAAAATTTCAGTGCAACAACTAATGAGTCAAGAGTTATTTAGATTTAAGACCAAGGTGATAAATTTTCAGATTGAAGGTGATTTGTCAGCATTTTGA 1746 0.3425 MEASAILNSGWWNISDYNYKDISSLCKWNGILCNHIGSITRINCPCYLRYEKAFHQFSSLKLSAFKNLERLDLWGCGLGGSIPFEIGNLTKLTFLDLSNNFLIGEIPFSIGKLAKITTIDLNHNLISGEIPPQLGYLSNLKNLDLSHNNLYGMIPQSLALLYKNKSKPINLFMSYNNLKGPIPHGLPPYTLMGNKDILASSKKPIYQQAKILPIIICPIALFLIIVCVKLIHNATKKKHAKPIATKNGDLFSIWNYDGHIAYEDIIKGTEGFDMKYCIGTGAYGCVYKVPLPNGKVVALKKLHGFMAEDPTSDESFRSEVDVLSKIKHRHIVKLLGFCLHKRIRFLIYEYMEKGSLFSVLYDDVEAIELEWRKRVNIIKGIAHALSYLHHDCIPPIVHRDISSSNILLNSEWQPNISDFGIARLLRYDSSNRTIVAGTYGYIAPELAYTMAVTEKCDVYSFGVVALETLMGKHPQEILSSLQSTYSHEITLCEVLDQRLAPPTIAVLLEIIDVAIVAFACLNNNPHYRPSMKCVSQSFLTQHTTLNIPLCKISVQQLMSQELFRFKTKVINFQIEGDLSAF* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1702 581 SUPERFAMILY L domain-like 23 186 - -
Lan1g1702 581 Gene3D Transferase(Phosphotransferase) domain 1 351 548 - -
Lan1g1702 581 Gene3D Ribonuclease Inhibitor 115 200 IPR032675 -
Lan1g1702 581 Gene3D Ribonuclease Inhibitor 3 114 IPR032675 -
Lan1g1702 581 PRINTS Leucine-rich repeat signature 92 105 - -
Lan1g1702 581 PRINTS Leucine-rich repeat signature 137 150 - -
Lan1g1702 581 SUPERFAMILY Protein kinase-like (PK-like) 255 536 IPR011009 -
Lan1g1702 581 ProSitePatterns Protein kinases ATP-binding region signature. 278 300 IPR017441 GO:0005524
Lan1g1702 581 Gene3D Phosphorylase Kinase; domain 1 232 350 - -
Lan1g1702 581 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 95 565 - -
Lan1g1702 581 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 118 - -
Lan1g1702 581 Pfam Leucine Rich repeats (2 copies) 66 107 IPR025875 -
Lan1g1702 581 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 95 565 - -
Lan1g1702 581 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 118 - -
Lan1g1702 581 ProSitePatterns Tyrosine protein kinases specific active-site signature. 396 408 IPR008266 GO:0004672|GO:0006468
Lan1g1702 581 ProSiteProfiles Protein kinase domain profile. 272 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1702 581 Pfam Protein kinase domain 277 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1702 581 ProSiteProfiles Leucine-rich repeat profile. 139 161 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1702 Lan-Chr1 30730731 30733757 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1702 12 444 Receptor kinase-like Gene Family AT4G08850 41.176 1.48e-99 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan1g1702 Pkinase 3.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1702 - - gmx:102661105 598.586