Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1687 ATGAAGAGAGAGCATCACCATCTTCATCCCAATCCAGGTGACTCATCATCTTCCATGTCAGCTGCTACCACCGGAAAATCAAACCTCTGGGAGGAAGACATCAGCGGCGGCGGCGGCATGGATGAGCTTCTCGCGGTGGTGGGATACAAAGTTAGATCATCAGATATGGCGGAGGTAGCTCAGAAAATAGAACAACTGGAAGAAGCTATGACAAATGTTGAAACCAACATTTCTTCACTCTCTTCGAACACCGTCCATTACAACCCATCAGATATCTCCACGTGGCTTGAATCCATGATTTCTGGGCTCAGTCCATCACAACACCAAGTTCAAGACGATTCCTTCTTTACTTCAACAACTGAATCCTCAACCATCACTTCCTCTTCTGACTATGACCTCGAAGCTATCCCTGGTAAAGCAATTTACACTAACATCAATAATAACAACATTGACAAACAACCGAAGCGGATGAGAACTTTATTATCATCCTCTTCCAGTCGGCCAATTGTACTGGCCAACTCGCAAGAGAATGGAATTAGATTAGTCCATACTTTATTGGCTTGCGGCGAGGCCGTAAGCCAAAACAACATGTCTATTGCGGAAGCCTTGCTTCACCAGATCGGGTTTCTTGCTTTGTCGCAACCTGGCGCGATGCGTAAGGTTGCGACTTATTTCGCTGAAGCTCTTGCTCGGCGAGTCTACGGGCTCTACCCTGAAACGCCGTTGCTCAACCAAAACAGCAACCACCACCTCTCCGAGATGCTTCAGATCCATTTCTATGAAACCTGTCCTTACCTCAAATTCGCGCACTTCACTGCGAATCAAGCTATACTAGAAGCTTTTCAAGGGAAGGACCGTGTTCATGTAATCGATTTCAGTATGAACCAAGGGATGCAATGGCCGGCGCTGATGCAAGCACTTGCGCTTCGTCCCGGTGGTCCTCCGGCGTTCAGGCTTACCGGAATCGGACCTCCGGCAATGGACAACTCCGATCATTTGCAAGAAGTTGGTTGGAAACTCGCTCAGCTTGCAGAAACGATTCACGTCGAGTTTGAATTTCGTGGATTGGTGGCTAATAGTCTCGCGGATCTGGACGCGTCGATGCTTGAACTCAGACCGAGTGAGACCGAGTCAGTGGCAGTTAACTCAGTATTCGAGTTTCATAAGCTCTTAGCTCGTCCCGGTGCGGTGGAGAAGGTTCTCTCTGTAGTGAAAAATGTTAAACCGGAAATCGTCACAGTTGTTGAACAAGAAGCGAACCATAACGGACCGGGTTTTCTGGACAGGTTCACTGAGTCATTGCATTATTACTCAACAATGTTTGACTCGCTTGAAGGATCAACACCATTGGAGTCACAAGATAAGGTGTTGTCAGAGGTTTATTTAGGGAAGCAAATCTGTAACGTGGTGGCGTGTGAAGGGCTGGACCGGGTTGAGAGACACGAGACTTTGAACCAGTGGAGAACCCGGTTCGGTTCAGCAGGTTTCATTCCGGTTCATTTGGGTTCAAACGCGTTTAAACAAGCGAGTATGCTATTGGCTTTATTTGCTGGTGGAGATGGATACAGAGTTGAAGAGAATAACGGTTGTTTGATGTTGGGTTGGCACACAAGGCCCTTAATTGCTACCTCCGCATGGAAACTCGGTGATGTAACTCAGTGA 1662 0.4753 MKREHHHLHPNPGDSSSSMSAATTGKSNLWEEDISGGGGMDELLAVVGYKVRSSDMAEVAQKIEQLEEAMTNVETNISSLSSNTVHYNPSDISTWLESMISGLSPSQHQVQDDSFFTSTTESSTITSSSDYDLEAIPGKAIYTNINNNNIDKQPKRMRTLLSSSSSRPIVLANSQENGIRLVHTLLACGEAVSQNNMSIAEALLHQIGFLALSQPGAMRKVATYFAEALARRVYGLYPETPLLNQNSNHHLSEMLQIHFYETCPYLKFAHFTANQAILEAFQGKDRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAMDNSDHLQEVGWKLAQLAETIHVEFEFRGLVANSLADLDASMLELRPSETESVAVNSVFEFHKLLARPGAVEKVLSVVKNVKPEIVTVVEQEANHNGPGFLDRFTESLHYYSTMFDSLEGSTPLESQDKVLSEVYLGKQICNVVACEGLDRVERHETLNQWRTRFGSAGFIPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWKLGDVTQ* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1687 553 Gene3D - 39 103 IPR038088 -
Lan1g1687 553 SMART DELLA_2 41 113 - -
Lan1g1687 553 PANTHER DELLA PROTEIN GAI1-RELATED 18 127 IPR030006 GO:0003712|GO:0005634
Lan1g1687 553 PANTHER DELLA PROTEIN GAI1-RELATED 164 548 IPR030006 GO:0003712|GO:0005634
Lan1g1687 553 Coils Coil 56 83 - -
Lan1g1687 553 MobiDBLite consensus disorder prediction 12 30 - -
Lan1g1687 553 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 164 548 IPR005202 -
Lan1g1687 553 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 18 127 IPR005202 -
Lan1g1687 553 MobiDBLite consensus disorder prediction 1 33 - -
Lan1g1687 553 Pfam GRAS domain family 181 547 IPR005202 -
Lan1g1687 553 Pfam Transcriptional regulator DELLA protein N terminal 41 107 IPR021914 -
Lan1g1687 553 ProSiteProfiles GRAS family profile. 172 547 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1687 Lan-Chr1 30381152 30383281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1687 31 548 GRAS Transcription Factor Family AT1G14920 67.528 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lan1g1687 GRAS 2.8e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1687 K14494 - rcu:8262526 782.326