Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1683 ATGGAGGAGGATGAGATTCAAGCACATGCAAGTAAGTTCCCAAGAATTGGAAATGGAAGAGAAGGAGGGAGTGGTGAGCAACAATATCCAATAGATGAGGAAGTAGATGGAGGATGCAATACAAAGAGTTTTCACACTTGGCACCATTCTTCAAGAATCATAAGGGTGTCTAGAGCATCTGGTGGGAAAGATAGGCACAGCAAAGTCATGACTTCAAAGGGCTTAAGGGACAGAAGAGTTAGGCTCTCTGTGGCCACAGCTATTCAGTTCTATGATCTTCAAGATCGCTTGGGTTTTGACCAACCAAGTAAAGCAGTTGAGTGGTTAATCAAATCAGCTTCAGATGCAATTTCTGACCTACCTTCATTGAACAACACATTCCCGGAGCAACCTAGAGATGAAAATCGAGCAGCAAGTGTGGGAACTCAAAAGGGATTTGGTTCGGCCGATGCAGAAATAGATGGTGAAACCAATTATCATCATAATCAAAGGCAACATCAGCAAAACAACAATCATAGCCAGAACCTTTCTTTGTCGAAGTCTGCTTGTAGCAGCACTTCTGAGACAAGCAAAGGTTCTGGCTTGTCCCTCTCTAGGCCTGATGTCCGGGTGAACCGAGTCAAGGCTAGAGAGAGAGCAAGGGAAAGAACAGAAAAGGAGAAAGAGAATGAACCTCACAACAACATTGCTCATCTTGTGAATGTGAACAACCCTATTTCTCAAACAGCTTCTTTCACTGAGCTGCTCACAAATGGAATCAGCAATGCCGTTCCCACAACAACTAGTCCTAATAATAATGCTTCAGTTATGAACCAAAATCAATGGTGCTCAACATCACCAATTGACAACTTCACCTCAAGGATTCTAGCACCTTCCTCTTCTTCAAGAACTACTTCTTCTAAATTCTCACAGATTCAATTTGGATATTCCCTTCATGAGGCCATGCAAGTTTCAAATTCCACCATCAATCTCAGTGGTAGTGATCATAATCAACATCATCATTTATCATTCATTCCTGATCATCTAATACCATCTATGGTTACTTCTTCATCCTCTGATCATCAGCCCAATCATGACTATAATCTCAACTTCGCGATCTCTCCGGGCCTTGCTACCTACAATAGGGGGACCCTTCAGTCCAATTCACAATCTCATATTTTACAAAATCATAATCATAATCACATGCAGAGGTTTACATCATCACCTATAGATGGATCCACTTACACTGTACCTTTCTTCATTGGAGCAGCTACACCTATGGAAAATAACAACAACAACAACAACATCCATCACCACCAACAACTTCAGTTCTCACCTATTTTCGATGGCCAAGGCTTGCAACTGGGCTACGGCGGCGACAGAAGCAGGCATTCAGAACAGAAGGGGAAAAACAAGAACTGA 1401 0.4233 MEEDEIQAHASKFPRIGNGREGGSGEQQYPIDEEVDGGCNTKSFHTWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVATAIQFYDLQDRLGFDQPSKAVEWLIKSASDAISDLPSLNNTFPEQPRDENRAASVGTQKGFGSADAEIDGETNYHHNQRQHQQNNNHSQNLSLSKSACSSTSETSKGSGLSLSRPDVRVNRVKARERARERTEKEKENEPHNNIAHLVNVNNPISQTASFTELLTNGISNAVPTTTSPNNNASVMNQNQWCSTSPIDNFTSRILAPSSSSRTTSSKFSQIQFGYSLHEAMQVSNSTINLSGSDHNQHHHLSFIPDHLIPSMVTSSSSDHQPNHDYNLNFAISPGLATYNRGTLQSNSQSHILQNHNHNHMQRFTSSPIDGSTYTVPFFIGAATPMENNNNNNNIHHHQQLQFSPIFDGQGLQLGYGGDRSRHSEQKGKNKN* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1683 466 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 466 IPR005333 GO:0003700
Lan1g1683 466 PANTHER TRANSCRIPTION FACTOR TCP24 1 466 - -
Lan1g1683 466 ProSiteProfiles R domain profile. 203 221 IPR017888 -
Lan1g1683 466 MobiDBLite consensus disorder prediction 442 466 - -
Lan1g1683 466 MobiDBLite consensus disorder prediction 119 227 - -
Lan1g1683 466 MobiDBLite consensus disorder prediction 203 227 - -
Lan1g1683 466 Pfam TCP family transcription factor 61 223 IPR017887 -
Lan1g1683 466 MobiDBLite consensus disorder prediction 162 196 - -
Lan1g1683 466 ProSiteProfiles TCP domain profile. 62 120 IPR017887 -
Lan1g1683 466 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1683 Lan-Chr1 30257499 30259516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1683 47 466 TCP Transcription Factor Family AT4G18390 41.480 7.86e-67 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan1g1683 TCP 5.6e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1683 - - lang:109362619 567.385