Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1676 ATGCGTTCTTATACAACATCAGTTTTGGCACATTTGTTTGGTATCCTTGCTATTATCCTATTGCTTGTTTGGTTGTTGCATTATCGTGAGGGGATTGAATATGATTCTGACAACCCACTTCGTGTCTTCAATGTTCACCCTTTACTGATGTTCTTGGGATTCATTTTCTTTGCTGGTCAAGCAATAATGGCATACCATACAGTACCAGGCGAGTGGCAAACACAGAGACTCATTCACGTGACACTTCATTTGATTGCTATAGTTCTTGGGATTGTTGGTATATGTGCTGTTTTCAGGTTCCATGATATGGTGAATTTGGAAGATGTTTATAGCCTCCATTCATGGATTGGCATTGCCACTTTCTGCTTGTTTGGTGTGCAGTGGCTTTTAGGACTTGCGTTCATGTTTAGAGGGTCCAGGGCAGAAAGGGCTGGGGTGGCACCATGGCACATAGCTGGTGGTAGAGCACTATTGTACATGGCAATATGTGCTGCACTAACTGGTTTGATGGAGAGGTTTACTATGCTAAAACCACACCAAAGTGAATCTCGTTTGATCAATTTCTTGGGCCTAGCAATTCTCGTGTTTGGTATTTTTGTTGATATAACAGTTAGTTTGGCCCATTTTGGCTCATGA 636 0.4198 MRSYTTSVLAHLFGILAIILLLVWLLHYREGIEYDSDNPLRVFNVHPLLMFLGFIFFAGQAIMAYHTVPGEWQTQRLIHVTLHLIAIVLGIVGICAVFRFHDMVNLEDVYSLHSWIGIATFCLFGVQWLLGLAFMFRGSRAERAGVAPWHIAGGRALLYMAICAALTGLMERFTMLKPHQSESRLINFLGLAILVFGIFVDITVSLAHFGS* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1676 211 SMART 561_7 45 169 IPR006593 -
Lan1g1676 211 CDD Cyt_b561_ACYB-1_like 36 177 - -
Lan1g1676 211 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 3-RELATED 4 207 - -
Lan1g1676 211 PANTHER CYTOCHROME B561-RELATED 4 207 IPR043205 GO:0016491
Lan1g1676 211 Gene3D - 1 208 - -
Lan1g1676 211 Pfam Eukaryotic cytochrome b561 45 173 IPR006593 -
Lan1g1676 211 ProSiteProfiles Cytochrome b561 domain profile. 9 205 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1676 Lan-Chr1 29707254 29710027 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1676 3 209 Chloroplast and Mitochondria Gene Families AT1G14730 61.611 3.44e-90 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1676 K08360 - gmx:100305990 317.775