Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1668 ATGAACATGTTTGCTTCCTTCACAAAACCTTTTGCATTTCCAATTTGTAGCGTTAGAGCTGATTCTGAATTCGGAGCCAAATCCAACTCACTCAAACCATCTTCATCATCATCTCTTCATTTTCAGCCTCACCCACTTGCAAGCAAAATTGTTGTTAAAAATTTACCATATTCTACTGGTGAGACTACTTTGCAGAAAGAATTTTCAAATTTTGGCAAGATAGCTGAAGTTAAAGTGGTTAAAGATGTGATCACGAAAAGATCTAAGGGATTTGCTTTTATTCAATATACAAGTCAAGATGATGCCATGCTTGCACTAGAAACCATGGATCAGAAGGTTTTTCATGGTCGGACAATTTGTGTTGAAATTGCAACACTTGGTAGGGATGATTTTGGTGCACACCCAAAGACCTCAGGGCCCCCAAAGAAGTGGAATTTGCCACAGCAAGAGGAAACAGTAGATTGTTGGTACTGA 474 0.3882 MNMFASFTKPFAFPICSVRADSEFGAKSNSLKPSSSSSLHFQPHPLASKIVVKNLPYSTGETTLQKEFSNFGKIAEVKVVKDVITKRSKGFAFIQYTSQDDAMLALETMDQKVFHGRTICVEIATLGRDDFGAHPKTSGPPKKWNLPQQEETVDCWY* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1668 157 Gene3D - 23 150 IPR012677 -
Lan1g1668 157 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD 42 151 - -
Lan1g1668 157 SMART rrm1_1 49 122 IPR000504 GO:0003723
Lan1g1668 157 SUPERFAMILY RNA-binding domain, RBD 36 130 IPR035979 GO:0003676
Lan1g1668 157 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL ISOFORM X1 42 151 - -
Lan1g1668 157 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 50 119 IPR000504 GO:0003723
Lan1g1668 157 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 48 126 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1668 Lan-Chr1 29536369 29539305 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1668 48 129 Eukaryotic Initiation Factors Gene Family AT2G36660 36.585 1.51e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1668 - - lang:109359823 304.293