Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1659 ATGGCCCTAGGAAGAGGTAGTGCAATGGTAGCTCTAATGCTACTACTAATGTGCTTGATGCTTCACTCTGAGATGGCTCATGCAGCCACTTACACAGTTGGGGATGCAAATGGTTGGACTTTTAACGCTGCTGGTTGGCCTAAAGGAAAGCGCTTCAGGGCTGGAGATACACTTGTGTTCAATTATAGCCCTGGGGCTCACAATGTAGTGGCTGTAGATAAAGTTGGTTACAGTGCATGCAAAACTCCTAAAGGTGCCAAAGTGTATAATTCAGGAAGTGATCAGATCAAGCTTGCTAAGGGACTCAACTACTTTATCTGCAATTTTGTTGGCCACTGCGAATCTGGCACCAAAGTTGCCATTAGTGCTGTGTGA 375 0.456 MALGRGSAMVALMLLLMCLMLHSEMAHAATYTVGDANGWTFNAAGWPKGKRFRAGDTLVFNYSPGAHNVVAVDKVGYSACKTPKGAKVYNSGSDQIKLAKGLNYFICNFVGHCESGTKVAISAV* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1659 124 SUPERFAMILY Cupredoxins 29 122 IPR008972 -
Lan1g1659 124 Gene3D - 29 123 IPR008972 -
Lan1g1659 124 ProSiteProfiles Phytocyanin domain profile. 29 124 IPR003245 GO:0009055
Lan1g1659 124 Pfam Plastocyanin-like domain 39 116 IPR003245 GO:0009055
Lan1g1659 124 PANTHER BASIC BLUE-LIKE PROTEIN 11 122 - -
Lan1g1659 124 PANTHER BLUE COPPER PROTEIN 11 122 IPR039391 GO:0009055
Lan1g1659 124 CDD Plantacyanin 29 123 IPR041844 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1659 Lan-Chr1 29070488 29071593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1659 10 124 Phytocyanin Superfamily AT1G17800 37.190 2.72e-22 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1659 - - gmx:100499869 192.971