Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1639 ATGGCGTTTTGGTGGCCATTGCTAGTTTTAGCATTCGCTTACGGCATTTGCAAGTTCCTTTTCATGCTCATTCCTCCATCTGTTCCTTCCATCGACGTTGACGCTTCTGATGTGTTGGAAGATGGAAACCAAACGCAGGAGAATAGCTTCATATATGTACCTCCAAGGGGGAACTCACAACAATCAAGCAAGATAGTTCAGTGCTATGAGCCTGCAACTATGAAATATTTGGGATATGTACCTGCATTGACGTATGATGAGGTCAAGGATCGAGTGGCAAAAGTAAGGAAGGCACAAAAAATGTGGGCAAAGACCAGCTTCAAGCAAAGGCGCTTGTTTTTGCGTATACTTTTGAAGTACATAATTAAACATCAAGCACTTATATGCGAAATATCTTCACGTGATACTGGAAAGACAACAATAGATGCTTCTTTAGGAGAAATAATGACAACATGTGAGAAGATCCATTGGCTACTGTCAGAGGGCGAGCGGTGGCTAAAGCCTGAATACCGTTCTTCTGGAAATTCAATGCTTCATAAGAGAGCCAAAGTAGAATTTCACCCCCTTGGTGTTATTGGTGCCATTGTTTCATGGAATTATCCTTTCCACAATATTTTTAATTCTATGCTGGCGGCACTTTTTTCTGGAAATGGCATTGTGATTAAGATATCGGAACATGCAAGTTGGTCTGGATGCTTTTACTTTCGGATCATCCAATCAGCCCTTGCTGCCATAGGAGCTCCAGAGGAACTTGTCGAGGTGATAACAGGGTTTGCTGAAACAGGAGAAGCCTTAGTATCTTCCGTTGATAAAGTCATATTTGTTGGGTCCCCTGGTGTTGGTAAGATGATAATGAGTAATGCTGCCGAGACACTTACACCAGTTACACTAGAGCTTGGTGGAAAAGATGCATTTATTGTCTGTGAAGATGCAGATGTAGATCATGTTGCGCAAATTGCTGTCCGGGCTGTTCTTCAGTCAAGTGGACAAAACTGTGCTGGGGCTGAGAGATTTTATGTCCACAGGGACATTTATGCTTCTTTTGTCAGTAAAGTTACCAAAATCATAAAATCTGTTACAGTTGGCCCTCCACTTGCTGGAAGGTATGATATGGGAGCTTTGTGCATGCATGAGCATTCTGAAAAGCTTGAAAGCCTTGTAAATGATGCTTTAGACAAAGGAGCTGAAATTGTTGCACGCGGAAGTTTTGGACATATAGGTGAAGATGCAGTTGATCAGTATTTCCCCCCTACTGTGATCATAAATGTAAACCACTCAATGAGATTGATGCAAGAAGAGGCATTTGGACCTGTCATGCCTATTATGAAATTTAGCTCTGATGAGGAGGCAGTAAAGCTTGCAAATGACTCAAAATATGGACTTGGGTGTGCTGTTTTCTCAGGCAGTCAGAGCCGTGCCAGAGAGATAGCTTCACAGATACATTGTGGCGTTGCTGCAGTTAATGATTTTGCAGCATCATACATGTGTCAGTCGCTCCCATTTGGGGGCGTGAAACATAGTGGGTTTGGACGATTTGGTGGTGTAGAAGGTTTGCGAGCTTGCTGTCTTGTAAAAGCAGTTGTTGAAGATAGATGGTGGCCATTTGTCAAAACCAAGATACCAAAGCCTATTCAGTATCCTGTTGCAGAGAATGGATTTGAATTTCAGGAGTCACTGGTTGAAGCACTTTATGGGCTCAGCATATGGGAACGTTTGCAAGCATTGGTAAAAGTGTTAAAAATGCTCACTGAGCAGAACCCTGCTGGAAGTAGCAGTAAGAGAGGAATTGATTAA 1794 0.4253 MAFWWPLLVLAFAYGICKFLFMLIPPSVPSIDVDASDVLEDGNQTQENSFIYVPPRGNSQQSSKIVQCYEPATMKYLGYVPALTYDEVKDRVAKVRKAQKMWAKTSFKQRRLFLRILLKYIIKHQALICEISSRDTGKTTIDASLGEIMTTCEKIHWLLSEGERWLKPEYRSSGNSMLHKRAKVEFHPLGVIGAIVSWNYPFHNIFNSMLAALFSGNGIVIKISEHASWSGCFYFRIIQSALAAIGAPEELVEVITGFAETGEALVSSVDKVIFVGSPGVGKMIMSNAAETLTPVTLELGGKDAFIVCEDADVDHVAQIAVRAVLQSSGQNCAGAERFYVHRDIYASFVSKVTKIIKSVTVGPPLAGRYDMGALCMHEHSEKLESLVNDALDKGAEIVARGSFGHIGEDAVDQYFPPTVIINVNHSMRLMQEEAFGPVMPIMKFSSDEEAVKLANDSKYGLGCAVFSGSQSRAREIASQIHCGVAAVNDFAASYMCQSLPFGGVKHSGFGRFGGVEGLRACCLVKAVVEDRWWPFVKTKIPKPIQYPVAENGFEFQESLVEALYGLSIWERLQALVKVLKMLTEQNPAGSSSKRGID* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1639 597 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491
Lan1g1639 597 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491
Lan1g1639 597 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 66 525 IPR016162 GO:0016491
Lan1g1639 597 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 561 - -
Lan1g1639 597 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 325 336 IPR016160 GO:0016491
Lan1g1639 597 SUPERFAMILY ALDH-like 62 529 IPR016161 GO:0016491
Lan1g1639 597 CDD ALDH_F15-22 69 531 - -
Lan1g1639 597 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620
Lan1g1639 597 PANTHER ALDEHYDE DEHYDROGENASE-LIKE PROTEIN YHR039C-RELATED 1 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1639 Lan-Chr1 28070010 28077189 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1639 1 594 Aldehyde Dehydrogenase Gene Family AT3G66658 79.630 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1639 - - gmx:100802990 1118.61