Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1588 ATGGAGCAGTTTGATCAGATTCCTACACAAATGGGATTCCTTCTTCCTTTCCCACCAAACCTTACCTCTTCTCCTTTGTTTTCTCCTCAATATTCTAAATCCTTCACTTCCATAACTCCTTCATCACTTGCATCTAATGAATTAGATGATGGTTCTACATCAAATCTAGCACAAACCCTAGTTGCAATCACTGCTCAAAAGTCAAAACATGGCCTCACGTCCACCTTTGGAGGACCTCAATTCCTTTCCTTGCATAGATCTAACGTAAATCCATGGTCCTTTGGAGAGGTAACTGATTGCTTCAGAAGTAAAAGAAGCCGAGAAGAAAACCATGATATGGGGTTTTTTGACATCAAAATGAAGGTGAAGAAAATGAAGGGAAGAAGGAAGGTGAGGGAGCCTAGGTTTTGCTTCAAGACAATGAGTGATGTGGATGTGTTGGATGATGGTTACAAGTGGAGGAAGTACGGACAGAAAGTGGTAAAGAACACACAGCATCCAAGAAGTTACTACCGTTGTACACAAGAAAATTGTCGCGTAAAGAAACGCGTGGAGCGATTAGCAGAAGATCCAAGAATGGTGATAACCACATATGAAGGTAGACATGTACATTCTCCACCAGATCTGAATCTTGAAGATTCTCATGCTCAATCTCAACTTACCAATTTCTTATGGTAA 678 0.4071 MEQFDQIPTQMGFLLPFPPNLTSSPLFSPQYSKSFTSITPSSLASNELDDGSTSNLAQTLVAITAQKSKHGLTSTFGGPQFLSLHRSNVNPWSFGEVTDCFRSKRSREENHDMGFFDIKMKVKKMKGRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQENCRVKKRVERLAEDPRMVITTYEGRHVHSPPDLNLEDSHAQSQLTNFLW* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1588 225 Gene3D WRKY domain 132 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan1g1588 225 SMART WRKY_cls 147 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan1g1588 225 SUPERFAMILY WRKY DNA-binding domain 139 207 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan1g1588 225 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 36 214 - -
Lan1g1588 225 Pfam WRKY DNA -binding domain 148 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan1g1588 225 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 36 214 IPR044810 GO:0003700
Lan1g1588 225 ProSiteProfiles WRKY domain profile. 142 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1588 Lan-Chr1 26911356 26915047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1588 106 225 WRKY Transcription Factor Family AT4G39410 69.048 1.81e-58 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan1g1588 WRKY 6.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1588 - - pvu:PHAVU_002G266400g 311.997