Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1565 ATGTCTTCTTCTTTCTTCTTCCTCTCATTTCTCTTCATCCTCACCCTCTCTTCCGCCGCCAAACCACCACCCTCCCTCACCACCACCGCCGCCACGTCGGTGATCCAACAAGCATGTAAAGCCACAAACTTCTCCCAACAATGCGAATCCACTCTCTCCCAATCCAACCTCCCACCCAACCCAACCTCCCTCCAACTCATCCAAGCCGCCATGGCTGCCTCCTCCTCCAACCTCACCACTGCCCTAACCATGGCCAAGTCCCTCCTCGACGCCTCCACCGACAACAAAAATCGCACCGTCGCCGCCGCCATCTGCCTAGAGGTTCTCAACAACTCCAAATACCGTATTTCTCTCGCCAACTCTTCCCTTCCAAGTGGAAAGACCAAAGACGCACGCGCCTGGCTCAGCGCCGCACTCGCCTACACCTACGATTGCTCCAACGTCCTCAAATACGTTAACGATACAAAGCAGGTCGCTGAAACGATTTCGTTTGTCGACTCCATATACACGCTGAACAGCAACACGCTCAGCTTGGCTTTTAACTACGACGCGTTCGGGGATGATATCGGGTCGTGGACACTACCGAAGACAGAGCGTGACGGATTCTGGGATAAACCCTGTTCAAATAGCGGTTCAGGAGCTGTGACCGGTTTACCGGATAAGTCGGAAGCAGATGTTACAGTTTGTAAGGGAGGGAAGAGTGGGTGTTTGGGGACGATTCAGGAAGCGGTTAATAAGGCACCGGATAACGGCGGTAAGAGAAAGAAGTTTGTGATATATATAAAGGAAGGGGTTTATAAAGAAACCGTTAAGGTTCCGTTAGAGAAAAGGAATGTGGTATTCTTGGGTGATGGAATTGGGAAGACGGTGATTACTGGCTCTGCGAATGCTGGTCAGGTTGGGGTCTCCACCTACACCTCAGCCACAGTCGCTGTTGTTGGCGATGGATTCGTGGCAAAGGACCTTACAATCCAAAACACAGCAGCTTCTCATCAAGCAGTGGCATTCAAATCAGACAGTGATCTTTCTATCATTCAGAACTGTGAATTCTTAGGAAACCAAGACACCCTTTTACCTCAATCCTTGCGCCAATTTTACAAATCATGCTATATCCAAGGCAACATAGACTTCATCTTTGGCAATTCTGCTACAATTTTTCAAGACTGTGAAATTTTAACTCGTCCAAGACAAGAGAACCCTGAGAAGGGTGCAAGCAATACAATCACAGCACATGGTAGAACAGACCCAGCACAAGCAACAGGTTTTGTTTTCCAGAACTGTTTGATCAATGGAACTAAGGAATATTTGGCATTATATCATAGCAACCCTAAAGTGCACAAGAATTTCTTGGGTAGGCCATGGAAGCTGTACTCTAGAACAGTTTTCATTAATTCTCGGATGGATGAGATTGTTACACCTCAGGGTTGGTCACCATGGACAGAAGCTCCACTGAAAACACTTTACTATGGTGAGTTTGAGAATTCAGGACCTGGTTCTGATTTGTCTCAGAGGGTGCCATGGAGTAGCAAAATTCCTTCTAAGCATGTGTTGGTATATTCAGTGGAGAATTTCATTCAAGGAAAGAGTTGGATTCCACCATCTCTATTATCATCCAAGGTTGGTAAGAGTAATTAG 1635 0.4722 MSSSFFFLSFLFILTLSSAAKPPPSLTTTAATSVIQQACKATNFSQQCESTLSQSNLPPNPTSLQLIQAAMAASSSNLTTALTMAKSLLDASTDNKNRTVAAAICLEVLNNSKYRISLANSSLPSGKTKDARAWLSAALAYTYDCSNVLKYVNDTKQVAETISFVDSIYTLNSNTLSLAFNYDAFGDDIGSWTLPKTERDGFWDKPCSNSGSGAVTGLPDKSEADVTVCKGGKSGCLGTIQEAVNKAPDNGGKRKKFVIYIKEGVYKETVKVPLEKRNVVFLGDGIGKTVITGSANAGQVGVSTYTSATVAVVGDGFVAKDLTIQNTAASHQAVAFKSDSDLSIIQNCEFLGNQDTLLPQSLRQFYKSCYIQGNIDFIFGNSATIFQDCEILTRPRQENPEKGASNTITAHGRTDPAQATGFVFQNCLINGTKEYLALYHSNPKVHKNFLGRPWKLYSRTVFINSRMDEIVTPQGWSPWTEAPLKTLYYGEFENSGPGSDLSQRVPWSSKIPSKHVLVYSVENFIQGKSWIPPSLLSSKVGKSN* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1565 544 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 181 IPR035513 -
Lan1g1565 544 Pfam Pectinesterase 225 527 IPR000070 GO:0030599|GO:0042545
Lan1g1565 544 Gene3D - 223 541 IPR012334 -
Lan1g1565 544 TIGRFAM PME_inhib: pectinesterase inhibitor domain 2 178 IPR006501 GO:0004857
Lan1g1565 544 PANTHER PECTINESTERASE 18 534 - -
Lan1g1565 544 PANTHER PECTINESTERASE 18 534 - -
Lan1g1565 544 SUPERFAMILY Pectin lyase-like 223 535 IPR011050 -
Lan1g1565 544 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 177 IPR035513 -
Lan1g1565 544 Pfam Plant invertase/pectin methylesterase inhibitor 34 177 IPR006501 GO:0004857
Lan1g1565 544 CDD PMEI-like_3 38 178 - -
Lan1g1565 544 SMART PMEI_2 30 178 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1565 Lan-Chr1 26367963 26371756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1565 35 530 Carbohydrate Esterase AT5G09760 60.317 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1565 - - gmx:100819675 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0684 12 13648227 13651453 Lan1g1565 1 26367963 26371756 LSH
Lan1g1565 1 26367963 26371756 Lan15g0531 15 12350789 12353749 PCT
Lan15g0531 15 12350789 12353749 Lan1g1565 1 26367963 26371756 PCT