Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1556 ATGAAACTTGACCCAAGTAACAATGTCCTACAAACTAAAAAGGAATACCAAATAATAATACATATGATGGCTAGTGGAAACATTAACCTTCCTCCTGGGTTTTGTTTCTCTCCAACAGATGAACAACTTGTCCTTCATTTTCTCTATTCCAAGGATTCTCTACCTTGTTATTCCAACATCATCCCTGATCTTCATGTGTCTCTGCCTGATCCTTGGGAATTAAATGGTAAGGCGTTGACAAGTGGAGATCAACATTATTTCTTCACAAAAGTGAAAGAAAACAAAACCACAGAAAATGGTTATTGGAATGAAATAGGAGTCACTGAACCTATATTCTCAGCCACTGATAAGAAAGTGGGAGTCAAGAAGTACCTGGTGTTCTACCTTGGGGAAGGTCCACGTGGCACTGAAACCTGTTGGGTCATGCAAGAATATCATATTTGCTCATATGTGTTTAACACACAATCTTATGATCTAAGTGGGAGCAAATGGGTCTTATGCAAAGTCTATGAAAGGAAGAAATTTCAATCTCAACAAGGTGCAAACTACTACTATAGTGATGAGGATGACAGTGGATCAGAGCTTTCATGGCAGGACGAAGTTTTTCTGTCTTTAGATGATGATCTTGAAGAAATTCAAAGCCTTCCGTAA 651 0.384 MKLDPSNNVLQTKKEYQIIIHMMASGNINLPPGFCFSPTDEQLVLHFLYSKDSLPCYSNIIPDLHVSLPDPWELNGKALTSGDQHYFFTKVKENKTTENGYWNEIGVTEPIFSATDKKVGVKKYLVFYLGEGPRGTETCWVMQEYHICSYVFNTQSYDLSGSKWVLCKVYERKKFQSQQGANYYYSDEDDSGSELSWQDEVFLSLDDDLEEIQSLP* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1556 216 SUPERFAMILY NAC domain 19 171 IPR036093 GO:0003677|GO:0006355
Lan1g1556 216 ProSiteProfiles NAC domain profile. 30 172 IPR003441 GO:0003677|GO:0006355
Lan1g1556 216 Gene3D NAC domain 39 177 IPR036093 GO:0003677|GO:0006355
Lan1g1556 216 PANTHER NAC TRANSCRIPTION FACTOR 56 25 212 - -
Lan1g1556 216 Pfam No apical meristem (NAM) protein 31 147 IPR003441 GO:0003677|GO:0006355
Lan1g1556 216 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 25 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1556 Lan-Chr1 26235903 26238579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1556 23 176 NAC Transcription Factor Family AT1G61110 38.728 1.97e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan1g1556 NAM 1.7e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1556 - - gmx:100779578 296.975