Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1546 ATGAACCTATCCGACCACGGCGGAGACGGCGGTGGAGGCCGGACAGTTTTAGTAGCCGTGAAGTTGGACCACCGGAGCCGGGAACTGCTGACCTGGTCTCTCGTTAAAGTTGCTGAGCCTGGTGACCTCGTGATTGCGCTTCACGCCATCGACACCGGTACTGAGGATGATACAGCGTCGCTTCTCTCTATTGTGAAGACTTTCGATTCAGTTCTCACGGCGTATAAAGGCTTCTGCAACTTGAAGCAGATTGGTCTGGAGCTTAAAGTGTGTAGAGGTGTGTCAGTACGGAAGCTTGTGGTGCAGGAGGCAAAATCACTTGACATTGCGGCGGTGATTCTAGGAACTAAGAAGACCTCTCATCCAATCCAGTCTTCAGCATCAGTTGCCAAATATTGTGCAAAGAAATTGCCCAAGCGTGTCTCTGTTTTTGCCGTGGGCAATGGCAAAGTTGCATTCCGCAGAGAACCTACTGGAATGTGTGAACCTCAAGTAAAATTAAATGAAAGCCCCAAATTGTTGAACAAATCTTTGGCTTCTTATACAAAGAAAAGACTAAAGAATTGTGAAAGCTGTACATGGGGGTTATCATCGCAAGAAAACTCTGCAACTAAACTTAATCAAGGGTTTAGTAATGGTCATGAAGAGGAAAGTTCTCTGGCGTTGATACCAATCCAAAAGCTTGATGATGTTCCTAATTATTCAGTTGTGGTGTGCAAATCAAACCGGTCAAAACCTGCTTGGTCATTTCTTCGCAAGGTGTTTCTCCCCAAAAATCATACACAGAAATCTCCTTTAGAAAATTCATCTGTTTTTCAACAGGCATCAAGACAACCCAACTGCCATTCTTCAGATGTAGTCCATCAAGAAAACAAATTGAAAACTGGCCAGAATGACAAATCCACTCTGGATGGGGAGAGTGGTGCCATTGTGCCATTTGGATCCGATGATATCATTCTTCCTCCTTCACTTTGCAGTGATTTGAGTGGCCTTGCTAAAGATTTGTTGGTCTTACGAGAGAAGTACTCATCTACATGCAGGTTATATAGTTTCCAGGAACTTGCAGCTGCAACTGCTAACTTCTCACACGAAAATTTGGTTGGAACAGGTGGCTGTAGCCATGTTTACCGAGGATGTCTTCTGGATGGCAAGGAATTGGCCATAAAAAGTTTGAAGTCATCTGAAGATGTGATAAAGGAATTTGTTCATGAAATTGAGATCGTTACAACTTTGCATCACACAAACATAATAACTCTATCTGGCTTTTGTTATGAGGGCAATAATTTACTACTGGTATATGATCTTTTATCAAGGGGAAGCCTAGAACAGAACCTTTATGGCAACAAGAACGACTGTAATGCATTCGGATGGCAGGAGAGGTACAAGGTAGCTGTGGGTGTAGCCGAGGCATTGAACTATCTGCATAATGGCTGTACACATGCTGTGATCCACAGGGATGTGAAATCTTCAAACATCCTTCTTTCTGATGATTTTGAGCCTCAGCTCTCAGATTTCGGACTGGCTAGTCGTGTCTCTTCATCACATAGTATTTGTACTGATGTAGCTGGAACTTTTGGATACCTAGCTCCTGAATACTTCATGCATGGTAGAGTGACTGACAAGATTGACGTATATGCTTTTGGTGTTGTACTCCTCGAGCTTCTCTCAAGTAAGAAGCCGATTAATAACGAATCTCCTAAGGGCCAAGAGAGCCTTGTTATGTGGGCAACACCAATTTTGAAGGATGGGAAGCTTTCACAGTTGCTTGATCCAAGCCTAGGCAGTGATTACAACCAGTGCCATATAGAAAGAATGGTTTTAGCTGCTACTCTTTGCATTAGACGATCACCTAGATTGCGACCTCAAATCTGCCTTTTGTTAAAACTCCTACATGGTGATGTAGAAGTAACAAGATGGGCAGAACAAGAAGTTCGTGTTTCACATGAACTTGTTGATGGATGTGATGGGGAACTAGTTTCAAACAATATTCTGTCCCACCTTGACCTTGCTTTGTTGGACTTGGAGGATGATACAGATTCTATTAGCAGCACCGAGCAGACTCTCTCATTTGAGGACTACTTGAGGCGTAGATGGAGTGGCTCATCAAGTTTCGGCTAA 2118 0.4344 MNLSDHGGDGGGGRTVLVAVKLDHRSRELLTWSLVKVAEPGDLVIALHAIDTGTEDDTASLLSIVKTFDSVLTAYKGFCNLKQIGLELKVCRGVSVRKLVVQEAKSLDIAAVILGTKKTSHPIQSSASVAKYCAKKLPKRVSVFAVGNGKVAFRREPTGMCEPQVKLNESPKLLNKSLASYTKKRLKNCESCTWGLSSQENSATKLNQGFSNGHEEESSLALIPIQKLDDVPNYSVVVCKSNRSKPAWSFLRKVFLPKNHTQKSPLENSSVFQQASRQPNCHSSDVVHQENKLKTGQNDKSTLDGESGAIVPFGSDDIILPPSLCSDLSGLAKDLLVLREKYSSTCRLYSFQELAAATANFSHENLVGTGGCSHVYRGCLLDGKELAIKSLKSSEDVIKEFVHEIEIVTTLHHTNIITLSGFCYEGNNLLLVYDLLSRGSLEQNLYGNKNDCNAFGWQERYKVAVGVAEALNYLHNGCTHAVIHRDVKSSNILLSDDFEPQLSDFGLASRVSSSHSICTDVAGTFGYLAPEYFMHGRVTDKIDVYAFGVVLLELLSSKKPINNESPKGQESLVMWATPILKDGKLSQLLDPSLGSDYNQCHIERMVLAATLCIRRSPRLRPQICLLLKLLHGDVEVTRWAEQEVRVSHELVDGCDGELVSNNILSHLDLALLDLEDDTDSISSTEQTLSFEDYLRRRWSGSSSFG* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1546 705 Gene3D Transferase(Phosphotransferase) domain 1 436 648 - -
Lan1g1546 705 Pfam Protein kinase domain 363 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1546 705 Pfam Universal stress protein family 14 143 IPR006016 -
Lan1g1546 705 Gene3D HUPs 9 146 IPR014729 -
Lan1g1546 705 PANTHER OS01G0253100 PROTEIN 10 699 IPR045271 GO:0004714|GO:0006468
Lan1g1546 705 ProSiteProfiles Protein kinase domain profile. 361 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1546 705 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 10 699 - -
Lan1g1546 705 Gene3D Phosphorylase Kinase; domain 1 332 435 - -
Lan1g1546 705 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 14 141 - -
Lan1g1546 705 CDD USP_Like 15 146 - -
Lan1g1546 705 SMART serkin_6 361 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1546 705 SUPERFAMILY Protein kinase-like (PK-like) 342 630 IPR011009 -
Lan1g1546 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1546 Lan-Chr1 26020705 26024986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1546 348 623 Trihelix Transcription Factor Family AT1G68690 43.262 1.89e-70 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lan1g1546 Pkinase 2.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1546 - - gmx:100815722 944.11