Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1538 ATGTCACCAATTGCTGTAACTGCATCAGCCACAACATCACTACTCGCTTTTCACCGCGGGGCGAAGCAATGGAACAAGATAATTCCGAGTTATTGGAGAAGAAGCAGTGGAATCGGTTCATCCTTATTCGCTAATTCTCACAGGAAACCCTTGCAATTCCGATTCTCAACTTCAGCGGCAAATGAGAGCAGTGGAGGTGTTGCGGAAGAGATAAGTGGAAGTGAAAAATTGCCGATCAATTTCGTCTGGTCTGATAATAAGAAGCCTAGGGTTTGTATATTAGGCGGTGGATTTGGTGGTTTGTATACTGCTTTAAGGTTGGAATCACTCGAGTGGCCTGATGACAAAAAACCACAGATTGTTCTTGTCGATCAGTCTGAACGCTTTGTTTTTAAGCCAATGTTGTATGAGCTTCTCTCTGGAGAAGTGGAGGAATGGGAAATAGCTCCTCGTTTCTCGGATTTGCTAGCAAACAGTAGTGTGCAGTTTTTTAAAGACAGGGTAAAACTTTTGCAACCCTCTGATCATTTGGGAACCAATGGATCCAACACTTCTAGCTGTGGGGGAACTGTTCATCTTGATAGTGGCCTTCTTATTGAATATGACTGGCTGGTTCTTGCATTGGGAGCTGAAGCTAAACTGGATGTTGTACCAGGTGCAGCAGAGTTTGCATTTCCATTCACAACACTAGAGGATGCACGAAAAGTTAATGATAAATTAACAACATTAGAGAGAACGACCTTTGGTAAGGACTTCCAAATTAGTGTGGCCATTGTTGGTTGTGGATACTCTGGAGTTGAATTAGCTGCAACCGTAGCAGAGCGTTTACAGAATAAGGGGATTATTAGAGCTATTAATGTTGATCCAATTATTTGCCCAAATGCCCCACCCAGCAATAGAGAAGCTGCACTGAAAGTTCTTTCATCCAGGAAGGTTGAACTTTTGTTGGGTTATTTTGTTCGCGGTATTCGGAGGGTGAGTGAATCAGACTCGTCAGATACCTCGGCCGGGGTAGATGAAAATCACATTGAAGTAGCACATAATTTGGAGAAATATATATTGGAGCTGCAACCTGCTGAAAGGGGGATACAAAATAAAATCATTGAAGCAGATCTAGTGTTGTGGACTGTTGGATCTAAGCCTCCTCTCCCTCAGCTGGAACCTTCAGATTTTCCATTTGTACTTCCACTTAATGCCCGGGGACAAGCTGAAACAGATGAAACCCTACGTGTTAAGGGTCACCCGCGAATATTTGCTCTTGGCGACTCTTCTGCGTTGAGGGATTCGAATGGAAGGATCCTTCCCGCCACTGCACAGGTTGCTTTTCAGCAAGCTGATTTTACGGGTTGGAATCTGTGGGCTGCAATCAATGGACGACCCCTTTTACCATTTAGGTTTCAAAATTTAGGAGAGATGATGACCCTCGGTAGATATGACGCTGCCATTTCTCCTAGTTTTGTTGAGGGGCTAACCTTGGAAGGTCCTATTGGCCATACTGCCAGGAAGTTAGCATATTTGATCAGGTTACCAACAGATGAACATAAACTTAAAGTGGGGATTAGCTGGCTCACAAAATCTGCTATTGATTCAGTGTCATTGCTACAAAGTACCTTAACCAAGGTCCTCTCCAACTCATAG 1638 0.4371 MSPIAVTASATTSLLAFHRGAKQWNKIIPSYWRRSSGIGSSLFANSHRKPLQFRFSTSAANESSGGVAEEISGSEKLPINFVWSDNKKPRVCILGGGFGGLYTALRLESLEWPDDKKPQIVLVDQSERFVFKPMLYELLSGEVEEWEIAPRFSDLLANSSVQFFKDRVKLLQPSDHLGTNGSNTSSCGGTVHLDSGLLIEYDWLVLALGAEAKLDVVPGAAEFAFPFTTLEDARKVNDKLTTLERTTFGKDFQISVAIVGCGYSGVELAATVAERLQNKGIIRAINVDPIICPNAPPSNREAALKVLSSRKVELLLGYFVRGIRRVSESDSSDTSAGVDENHIEVAHNLEKYILELQPAERGIQNKIIEADLVLWTVGSKPPLPQLEPSDFPFVLPLNARGQAETDETLRVKGHPRIFALGDSSALRDSNGRILPATAQVAFQQADFTGWNLWAAINGRPLLPFRFQNLGEMMTLGRYDAAISPSFVEGLTLEGPIGHTARKLAYLIRLPTDEHKLKVGISWLTKSAIDSVSLLQSTLTKVLSNS* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1538 545 PANTHER ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE C1, CHLOROPLASTIC/MITOCHONDRIAL 1 543 - -
Lan1g1538 545 Gene3D - 86 518 - -
Lan1g1538 545 Pfam Pyridine nucleotide-disulphide oxidoreductase 90 445 IPR023753 GO:0016491
Lan1g1538 545 SUPERFAMILY FAD/NAD(P)-binding domain 242 386 IPR036188 -
Lan1g1538 545 PRINTS FAD-dependent pyridine nucleotide reductase signature 91 110 - -
Lan1g1538 545 PRINTS FAD-dependent pyridine nucleotide reductase signature 201 219 - -
Lan1g1538 545 PRINTS FAD-dependent pyridine nucleotide reductase signature 255 273 - -
Lan1g1538 545 PRINTS FAD-dependent pyridine nucleotide reductase signature 370 386 - -
Lan1g1538 545 PANTHER APOPTOSIS-INDUCING FACTOR 1 1 543 - -
Lan1g1538 545 PRINTS Pyridine nucleotide disulphide reductase class-I signature 90 112 - -
Lan1g1538 545 PRINTS Pyridine nucleotide disulphide reductase class-I signature 255 280 - -
Lan1g1538 545 PRINTS Pyridine nucleotide disulphide reductase class-I signature 417 424 - -
Lan1g1538 545 SUPERFAMILY FAD/NAD(P)-binding domain 87 457 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1538 Lan-Chr1 25891266 25896671 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1538 63 446 Chloroplast and Mitochondria Gene Families AT4G21490 21.013 1.11e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1538 K17872 - gmx:100795521 894.804