Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1532 ATGGCTCACCCAAATTTTAGTTATGATCCTCTCAAAATATTGATGATGTGGCTGTTATTCCTTAGTGTCTTCAAACTCAGTCATGCAATCAAGGATCCTGATGTAGAAGGAGAAGCTCTGCTAGATTTGTTGAGTTACCTAAATGATTCCAATAATCAAATAGATTGGGATAGTCATTTGGTTAGTCCATGCTTTAGTTGGTCTCATGTCACTTGCAGAAATGGACATGTCATATCTTTAACCCTGGCCTCCCATGGATTTTCTGGAACACTGTCTCCCTCAATTGCAAAATTGAATTACTTGGTTAGCTTGGAACTACAGAACAACAATCTTTCAGGTTCCTTACCTGGTTACATTGCCAACTTGACAAATCTACAATATCTGAATCTTGCTGACAATAATTTTAAGGGTTCTATACCAGATACATGGGGTCAACTTACCAGTCTAAAGCATCTGGATCTTTCATCAAATGATCTTACTGGAAGTATTCCAATGCAACTGTTTTCAGCTCCAATGTTCAACTTTTCAGATACACACCTTCATTGTGGAGAGGGCTTTGAGCAGCCTTGTGTTCCTAAATCTGAACATCCAGCTTCAACACACAAATCAAAACATACAAAGGTTGTAGGTTTTGCAAGTTGTGGTGCATTTGCAATTCTTTGTCTTGGAGCTATCTTTTCATATAGGTACCATCAAATGCAAAGACACAAAAGTGATATCTTTGCCGATGTTTCAGGTAAATATGAGAGAAAAATTTCCTTTGGGCAACTTAGAAGATTCTCGTTGCGTGAACTCCAAGTTGCTACTAAGAATTTCAGCGAAAGCAACGTAATTGGGCAAGGAGGATTTGGAAAAGTTTACAAAGGAACACTATCAGATAATACAAAAGTTGCGGTGAAACGCCTCTCTGATTATAATAACCCTGGTGGAGAGGCTGCATTTGAAAGAGAAGTTCAACTTATAAGTGTTGCAGTTCATAGAAATCTCCTGAGACTCATAGGTTTCTGTACTACTACAACTGAAAGAATCCTTGTATATCCTTTCATGGAAAATCTAAGCGTCGCATATCGACTGAGAGATTTAAAATCTGATGAGAAAGGTTTGGACTGGCCAACAAGGAAAAAAGTGGCTTTTGGTACAGCCCATGGTTTGGAGTATCTACATGAACAATGCAACCCTAAGATAATACATCGCGATCTAAAGGCTGCAAATATCCTACTAGATGATGAATTTGAAGCTGTTCTAGGTGATTTTGGACTAGCCAAGTTGGTTGATACAAGAATGACTCATGTTACCACTCAAGTGAGGGGCACAATGGGTCACATTGCTCCAGAATATTTATCAACCGGAAAATCATCAGAAAAGACAGATGTTTTTGGTTATGGTATAACACTTCTTGAACTAGTCACAGGTGAGCGTGCAATCGATCTCTCGCGCCTTGAAGAAGAGGAGGATGTTCTTCTGATTGATCATGTGAAAAAGCTAGTAAGAGAAAATAGGCTGGGGGACATTGTGGATAACAATTTGGAGAGTTATGATACAAAAGAAGTTGAGACAATTCTTCAAGTTGCATTGCTTTGCACACAAGGCTTTCCGGAGGATCGTCCAACAATGTCAGAAGTAGTGAAAATGCTGCAAGGAATTGGTTTAGCAGATAAATGGGCTAATTGGCAGCAACTTGAAGAAACTAGGAATCAAGAATTCTCACTCATGACTCATCAATTTGTTTGGAGTGATGAATCTACTTTTGATCAAGAGGCTATGCACCTTTCCAAAGCAAGATAG 1785 0.3894 MAHPNFSYDPLKILMMWLLFLSVFKLSHAIKDPDVEGEALLDLLSYLNDSNNQIDWDSHLVSPCFSWSHVTCRNGHVISLTLASHGFSGTLSPSIAKLNYLVSLELQNNNLSGSLPGYIANLTNLQYLNLADNNFKGSIPDTWGQLTSLKHLDLSSNDLTGSIPMQLFSAPMFNFSDTHLHCGEGFEQPCVPKSEHPASTHKSKHTKVVGFASCGAFAILCLGAIFSYRYHQMQRHKSDIFADVSGKYERKISFGQLRRFSLRELQVATKNFSESNVIGQGGFGKVYKGTLSDNTKVAVKRLSDYNNPGGEAAFEREVQLISVAVHRNLLRLIGFCTTTTERILVYPFMENLSVAYRLRDLKSDEKGLDWPTRKKVAFGTAHGLEYLHEQCNPKIIHRDLKAANILLDDEFEAVLGDFGLAKLVDTRMTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGERAIDLSRLEEEEDVLLIDHVKKLVRENRLGDIVDNNLESYDTKEVETILQVALLCTQGFPEDRPTMSEVVKMLQGIGLADKWANWQQLEETRNQEFSLMTHQFVWSDESTFDQEAMHLSKAR* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1532 594 Gene3D Transferase(Phosphotransferase) domain 1 349 565 - -
Lan1g1532 594 Gene3D Ribonuclease Inhibitor 33 191 IPR032675 -
Lan1g1532 594 Pfam Leucine rich repeat 101 159 IPR001611 GO:0005515
Lan1g1532 594 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 12 594 - -
Lan1g1532 594 SMART serkin_6 272 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1532 594 ProSitePatterns Protein kinases ATP-binding region signature. 278 300 IPR017441 GO:0005524
Lan1g1532 594 ProSiteProfiles Protein kinase domain profile. 272 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1532 594 SUPERFAMILY L domain-like 37 170 - -
Lan1g1532 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 395 407 IPR008271 GO:0004672|GO:0006468
Lan1g1532 594 Pfam Protein kinase domain 273 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1532 594 PANTHER LRR RECEPTOR-LIKE KINASE 12 594 - -
Lan1g1532 594 Gene3D Phosphorylase Kinase; domain 1 241 348 - -
Lan1g1532 594 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Lan1g1532 594 SUPERFAMILY Protein kinase-like (PK-like) 249 546 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1532 Lan-Chr1 25792959 25797546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1532 33 594 Receptor kinase-like Gene Family AT5G10290 56.027 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lan1g1532 Pkinase 1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1532 - - gmx:100800886 1006.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1894 1 34163988 34169272 Lan1g1532 1 25792959 25797546 LSH