Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1525 ATGGAGAAGTATGAGACTGTTAAAGATTTAGGAGCTGGGAATTTTGGGGTGGCTAGGCTCATGAGGAATAAGGAGACTAAGGAGCTTGTTGCCATGAAATACATAGAGCGTGGCCATAAGATTGATGAGAATGTGGCAAGAGAGATTATCAACCATAGGTCCCTTCGGCACCCGAATATAATTCGCTTCAAGGAGGTGGTTTTGACCCCAACTCATTTAGCAATAGTAATGGAGTATGCAGCTGGAGGAGAACTCTTTGAGAGGATTTGCAATGCCGGAAGATTCAGTGAAGATGAGGCTAGATATTTCTTTCAGCAGCTTATATCTGGTGTCCATTACTGTCATGCCATGCAAATATGCCATAGAGATTTGAAGCTAGAAAATACTCTTTTAGATGGAAGCCCTGCACCTCGCTTGAAAATATGCGACTTCGGTTATTCCAAGTCATCTTTGCTTCATTCACTACCCAAATCAACTGTTGGAACCCCTGCTTATATAGCACCAGAGGTTCTTTCTAGGAGGGAGTATGATGGGAAGTTGGCTGATGTATGGTCATGTGGAGTGACTCTTTATGTGATGTTGGTTGGAGCATATCCCTTTGAGGATCATGAAGACCCTAAGAATTTTAGGACAACAATTCAGCGTATAATGGCTGTTCAATACAAAATCCCGGATTATGTTCACATATCTCAAGATTGCAGACACATCCTTTCTCTTATATTTGTTGCAAATCCATTGAGGAGAATCACTCTGAAGGAAATTAAGAACCACCCATGGTTTTTAAAGAATCTTCCAAGGGAACTAACTGAATCAGCTCAAGCTATCTATTACCAGAGAAGAGGCAACCCAAGTTTTTCTGTTCAAAGTGTGGAAGAGATAATGAAAATTGTGGAGGAAGCAAGAGAACCTCCTCTAGTATCTATGCATGTCAAAGGCTATGGCTGGGAAGGTGTAGAAGAAGAAGAAGAAGAAGAGTATGAGAAGAGGGTAAAAGAGGTTCAAGCAAGTGCAGAATTTCATATCAGTTAA 1029 0.4111 MEKYETVKDLGAGNFGVARLMRNKETKELVAMKYIERGHKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVHYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSLPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDHEDPKNFRTTIQRIMAVQYKIPDYVHISQDCRHILSLIFVANPLRRITLKEIKNHPWFLKNLPRELTESAQAIYYQRRGNPSFSVQSVEEIMKIVEEAREPPLVSMHVKGYGWEGVEEEEEEEYEKRVKEVQASAEFHIS* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1525 342 SUPERFAMILY Protein kinase-like (PK-like) 2 292 IPR011009 -
Lan1g1525 342 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lan1g1525 342 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Lan1g1525 342 PANTHER SERINE/THREONINE KINASE 2 331 - -
Lan1g1525 342 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 2 331 - -
Lan1g1525 342 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1525 342 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Lan1g1525 342 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1525 342 CDD STKc_SnRK2 3 259 - -
Lan1g1525 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Lan1g1525 342 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1525 Lan-Chr1 25730075 25733970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1525 3 263 CBL-interacting serine-threonine protein kinases AT2G26980 41.544 5.01e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lan1g1525 Pkinase 9.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1525 K14498 - gmx:100804018 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1525 1 25730075 25733970 Lan14g0413 14 9218025 9221760 PCT
Lan14g0413 14 9218025 9221760 Lan1g1525 1 25730075 25733970 PCT