Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1523 ATGGAGAGGAAAACACTTTGTATTTTGTTCTTGCTCCTCCTCGTCTTTGCTGCAGATAATAATGTGGGATTGAAGAGAGCAGAAGGGAGACTATGCCAGTCAAAGAGCCACAGGTTCAAGGGTTCGTGCCTTAGTCATAGCAACTGTGGACAGGTTTGCAAGAACGAAGGTTTCACTGGTGGTAAATGCAGAGGGTTTCGTCGTCGCTGTTTTTGCACCAGGAATTGTTGA 231 0.4589 MERKTLCILFLLLLVFAADNNVGLKRAEGRLCQSKSHRFKGSCLSHSNCGQVCKNEGFTGGKCRGFRRRCFCTRNC* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1523 76 ProSitePatterns Gamma-thionins family signature. 30 53 IPR008176 GO:0006952
Lan1g1523 76 PANTHER DEFENSIN-LIKE PROTEIN 1 1 76 - -
Lan1g1523 76 SMART gth_4 31 76 IPR003614 GO:0006952
Lan1g1523 76 Gene3D - 30 76 IPR036574 -
Lan1g1523 76 PRINTS Purothionin signature 31 46 IPR008176 GO:0006952
Lan1g1523 76 PRINTS Purothionin signature 61 75 IPR008176 GO:0006952
Lan1g1523 76 PANTHER DEFENSIN MTDEF4.7 1 76 - -
Lan1g1523 76 CDD Knot1 41 73 IPR003614 GO:0006952
Lan1g1523 76 SUPERFAMILY Scorpion toxin-like 30 76 IPR036574 -
Lan1g1523 76 Pfam Gamma-thionin family 30 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1523 Lan-Chr1 25683448 25684181 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1523 1 76 Plant Defensins Gene Families AT2G02100 51.316 4.53e-25 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1523 - - oeu:111388015 62.7734