Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1521 ATGGTTAGGTCTCCATGTTGTGAGAAAGAACATACAAGAAAAGGACCTTGGACTAGAGAAGAAGATGATAGCCTCACTAGACACATCATGTTTCATGGTATAGGTCGATCATGGAGGGCTCTTCCCAGAGAAGCAGGATTGAACCGATGTGGCAAGAGTTGCCGGTTAAGATGGATTAATTACCTGCAACCAGGTGTTAAGCGAGGGAACTTCACTTTACTAGAAAATAGAATGATTGTGAACCTGCATGCCCAGCTCGGAAACAAGTGGTCTTCGATAGCTGGAAGGTTACCAGGTAGAACAGATAATGAGATTAAGAATAATTGGAATACCAACCTCTTAGCGAATGGAATCGATCCTAGAACTCATAAACCACTCTCCACCGCCATTTTCACCACCCCAGCTCCACCTAACAACAAAATCAACTCCTCCTCCGACACCACTAGAACTCCAACCACTGATAGTGCAACTTCAATGTCTGTGGTCACAACAAACAGCAACAGCACCACCACCACCATGATGAAGATTGGAATTCAGACATCATCAGGTAGTGAAGTTGAAGTTGAATCATGTCCTGAACTCAACTTGGAACTCTCCTTAGCACTTCCCTCACACTAG 618 0.4434 MVRSPCCEKEHTRKGPWTREEDDSLTRHIMFHGIGRSWRALPREAGLNRCGKSCRLRWINYLQPGVKRGNFTLLENRMIVNLHAQLGNKWSSIAGRLPGRTDNEIKNNWNTNLLANGIDPRTHKPLSTAIFTTPAPPNNKINSSSDTTRTPTTDSATSMSVVTTNSNSTTTTMMKIGIQTSSGSEVEVESCPELNLELSLALPSH* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1521 205 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Lan1g1521 205 Gene3D - 6 67 - -
Lan1g1521 205 CDD SANT 16 62 IPR001005 -
Lan1g1521 205 SMART sant 13 64 IPR001005 -
Lan1g1521 205 SMART sant 67 115 IPR001005 -
Lan1g1521 205 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 118 IPR017930 -
Lan1g1521 205 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Lan1g1521 205 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Lan1g1521 205 MobiDBLite consensus disorder prediction 132 159 - -
Lan1g1521 205 PANTHER BNAANNG06630D PROTEIN 1 187 - -
Lan1g1521 205 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lan1g1521 205 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 187 - -
Lan1g1521 205 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Lan1g1521 205 CDD SANT 70 113 IPR001005 -
Lan1g1521 205 Gene3D - 70 113 - -
Lan1g1521 205 SUPERFAMILY Homeodomain-like 13 109 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1521 Lan-Chr1 25672267 25673439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1521 1 203 MYB Transcription Factor Family AT4G34990 50.242 6.60e-63 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan1g1521 Myb_DNA-binding 9.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1521 K09422 - fve:101312499 206.453