Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1507 ATGGAACCAGACGCATTCACTTCCACCCTTTTCAAGTGGGACCCACGTACCGTCCTTCCAACACCTCCTCCTCCACCCAACCGCCACCAGATTCTGGACTACACCGTTCCCCCTCCGGTGGCTCATCCGGCGAGATCACTACTGGGTGGGTTAGAGGACGTTTTCCACGCTTACGGCGTCAGGTACTACACGGCGGCGAAGGTGGCGGAGCTGGGGTTCACGGCGAACACCCTTGTGGATATGAAGGATGAAGAGCTTGATGACATGATGAACAGCCTCTCACAAATTTTTCGGTGGGATCTTCTCGTTGGAGAGCGTTATGGCATCAAAGCCGCCGTTAGAGCTGAGCGAAGACGCATTGACGACCAGGAAATGAAGCGGCGCAACCTACTAACCGCCGATGCAACCACCACCAACGCTCTTGATGCTCTCTCTCAAGAAGGGTTGTCGGAAGAGCCAGTAGTGCAGCAAGAAAAGGAAGCAGTAGGGAGCACATGGGAGGTGGTTGTTGCGGCGGAGAGGAGGAAGCAGCAACAAAGGAGGAGGAGAACAAGAATGAAGGTGAATAATCATAATCATCATAATGAGAATGAAGATCCTGAAGATGAGGAAGGAGAAGAAGATGATGAAGGGAACAATAATGGTGGTGGTGAGAGACAGAGAGAGCACCCATTCATTGTGACTGAGCCTAGGGAGGTTGCACGTGGAAAGAAGAACGGTTTGGATTATCTCTTTCATCTCTATGAGCAATGCCGTGAGTTCTTGATCCAGGTTCAGCATATCGCCAAGGATCGTGGTGAAAAATGCCCTACCAAGGTGACAAATCAAGTATTCAGGTTCGCTAAGAAAGCAGGAGCTAGCTACATTAACAAGCCCAAAATGCGTCACTACGTGCACTGTTACGCGTTACACTGTCTTGACGAGGAAGTATCAAATGAACTAAGAAGGGCATTCAAAGAGAGAGGAGAAAACGTTGGAGCATGGAGACAAGCATGTTACAAGCCACTTGTGGAAATAGCATCACTTCAAGGTTGGGACATTGATGCTATATTCAATGCACATCCTCGTCTTTCAATATGGTATGTTCCAACAAAGCTTCGTCAACTTTGTCATGCTGAAAGGAACATTAATGGTGCATCTAGTTCTGTCTCTGTTGTCACCACTCACCATCTTCCTAATTTCTAA 1185 0.4852 MEPDAFTSTLFKWDPRTVLPTPPPPPNRHQILDYTVPPPVAHPARSLLGGLEDVFHAYGVRYYTAAKVAELGFTANTLVDMKDEELDDMMNSLSQIFRWDLLVGERYGIKAAVRAERRRIDDQEMKRRNLLTADATTTNALDALSQEGLSEEPVVQQEKEAVGSTWEVVVAAERRKQQQRRRRTRMKVNNHNHHNENEDPEDEEGEEDDEGNNNGGGERQREHPFIVTEPREVARGKKNGLDYLFHLYEQCREFLIQVQHIAKDRGEKCPTKVTNQVFRFAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRAFKERGENVGAWRQACYKPLVEIASLQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNINGASSSVSVVTTHHLPNF* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1507 394 Gene3D Protein LEAFY 215 384 IPR038276 -
Lan1g1507 394 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 213 376 IPR035209 GO:0003677
Lan1g1507 394 Pfam Floricaula / Leafy protein SAM domain 48 124 IPR035079 -
Lan1g1507 394 PANTHER PROTEIN LEAFY 1 392 IPR002910 GO:0003677|GO:0006355
Lan1g1507 394 MobiDBLite consensus disorder prediction 174 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1507 Lan-Chr1 25488126 25491941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1507 1 375 Orphan Transcription Factor Family AT5G61850 65.228 3.16e-162 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Lan1g1507 C_LFY_FLO 7.3e-106 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1507 - - gmx:100798196 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1507 1 25488126 25491941 Lan1g1507 1 25488126 25491941 ECH