Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1498 ATGCCCTTTTCCAAGTGCAACTTCTTCTCTTCCTTTAACTCCTTCTACCACTTTCTCACCTCAAAAAACTCAACCAACTTCCTTGTTTGTCTTGTTATTCTCTTCCCTAAGCCAACAAAACCAAACCCTTTTGTTTTTTGTCAAGAAGAGAACACAAAAACAATGATGTCTAGAGGTTCATGGGTGGTAGAAGCTGATAGAGAACAACAACACTCCAATGGGAACAACATCAACAAGGATGAATTGAGTTCTTTGTGTGGTTTTAAACCCATGTTTGAGGTCAATGAAGAATGGTACATGACAAATAACACTAACCAAAATAACATGGTGTTCTCTCCCAACTTTGCTGACACAGATAACATATTGCTTCACTCATTAGACTCTTCCTCTTCTATTCTCACCAATCTCCATTCATCTCAGGTGCAACACTTTCTGCCACCAAAACCCACTTTTTCTTCTCTTCTCAACACCAACCCTTTGGAGCATGGTTTTGATCACAATGGCTATGAGGTTGGGTTTCTTGAGCCTCAAGCTTCCAATTCCAACAACACATCAAATAATAACCAGTTAAGCACCCTTTCAAGTTATTTGAGCTTAGACCCTCATTTAGAAACTATGTGTATGAATATGATACCACAAGTACCACAAAGTAGTGTGGAATTTGATGGTTTTCACAACCTTCAGGAGAGTTCTAGAGATGGTTTGGTTCTGAATAGGTCAAATATATTGAAACCCCTTGAAACTTTCCCTCAATCTGGTGCAGTACAACCAACTCTTTTTCAGAAGAGAGCAGCACTTTGGAACAAAAACTTGACAGATAAGAAGAGCAACTTGAGCAAGTGTGAAGTGCTTCAGGAGGTGAATTGTGATAAGAAAAGAAAGATGAGTAATAGAGAAGACCATGCAGAAGGTGGAAGTTTTGATGGGTCAGGAGGAGGATTGAATAACTATGATTCTGATAATGAGATAACTGAGAGTATTGATAATAATAAGATGGAAGAGAATGGAAAAAGTGGTGGAAACAGTTCAAATGGTAACAGCAATATCAGTGGCTTGGATCAGAAAGGGAAGAAGAAAAAGAATGGAATGCCTGCTAAGAATTTGATGGCTGAGCGTCGCAGAAGGAAGAAACTCAATGATAGACTTTATATGTTAAGGTCACTTGTTCCAAATATTAGCAAAATGGACAGGTCTTCAATCCTTGGGGATGCAGTTGAGTATTTAAAGGAACTTCTGAAAAGGATCAATGACCTTCATAATGAATTGGAGTCAACACCTTCTGGATCTTCACTCACAACTGCTTCAAGCTTTCCTCATTTGTCACCAACTCTACCTATACTACACAACCGTATCAAAGAACAACTTTGTCCAACCTCATTGCTTAGCCCAAATGGCCAACCTGCTAGGGTTGAGGTTCGGGTGCGTGAAGGAAGAGTCATAAATATTCATATGTTTTGTGTCCGCAAACCTGGTATATTGCTCTCAACCATGAAGACTTTGGATAATCTTGGGTTAGACATTCAGCAAGGTGTGATAAGCTATTTCAATGGATTTGCCATGGATATTTTTCGAGCTGAGCAATGCATGGAAGGTCATGATATCCATCCAGAGCAAATCAAAGCAGCACTCCTTGATTCAGCTGGTTTCCATAACATGACCTAA 1662 0.3941 MPFSKCNFFSSFNSFYHFLTSKNSTNFLVCLVILFPKPTKPNPFVFCQEENTKTMMSRGSWVVEADREQQHSNGNNINKDELSSLCGFKPMFEVNEEWYMTNNTNQNNMVFSPNFADTDNILLHSLDSSSSILTNLHSSQVQHFLPPKPTFSSLLNTNPLEHGFDHNGYEVGFLEPQASNSNNTSNNNQLSTLSSYLSLDPHLETMCMNMIPQVPQSSVEFDGFHNLQESSRDGLVLNRSNILKPLETFPQSGAVQPTLFQKRAALWNKNLTDKKSNLSKCEVLQEVNCDKKRKMSNREDHAEGGSFDGSGGGLNNYDSDNEITESIDNNKMEENGKSGGNSSNGNSNISGLDQKGKKKKNGMPAKNLMAERRRRKKLNDRLYMLRSLVPNISKMDRSSILGDAVEYLKELLKRINDLHNELESTPSGSSLTTASSFPHLSPTLPILHNRIKEQLCPTSLLSPNGQPARVEVRVREGRVINIHMFCVRKPGILLSTMKTLDNLGLDIQQGVISYFNGFAMDIFRAEQCMEGHDIHPEQIKAALLDSAGFHNMT* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1498 553 MobiDBLite consensus disorder prediction 353 375 - -
Lan1g1498 553 Coils Coil 405 425 - -
Lan1g1498 553 Gene3D - 353 426 IPR036638 GO:0046983
Lan1g1498 553 CDD bHLH_AtAMS_like 365 436 - -
Lan1g1498 553 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 119 552 - -
Lan1g1498 553 PANTHER BHLH TRANSCRIPTIONAL FACTOR 119 552 - -
Lan1g1498 553 MobiDBLite consensus disorder prediction 333 352 - -
Lan1g1498 553 MobiDBLite consensus disorder prediction 294 375 - -
Lan1g1498 553 SMART finulus 368 417 IPR011598 GO:0046983
Lan1g1498 553 Pfam Helix-loop-helix DNA-binding domain 369 411 IPR011598 GO:0046983
Lan1g1498 553 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 362 411 IPR011598 GO:0046983
Lan1g1498 553 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 365 428 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1498 Lan-Chr1 25266649 25270018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1498 88 526 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 46.368 3.59e-97 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan1g1498 HLH 9.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1498 - - lang:109358267 1032.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1498 1 25266649 25270018 Lan1g1498 1 25266649 25270018 ECH