Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1494 ATGGCTCCCTCAGACTATTCTCTTGTTCCTTCATTCCTATACTCATCAAAATCACTCTCCAATTTGGATAATACTTCTATCAACACAAATCATGGGTTACCACCATCACATTCATCATCGTTATCATCACATGTTGATAGGAAGAATCATATTATGATCCCTGCACCTAAGGAGAGTATTCGCATGTTTTCTCCTGCTTACTATGCTGCATGTTCTGCTGGTGGCATCTTTAGCTGTGGCCTTACCCACATGGCCGTCACTCCTCTTGATCTTGTCAAGTGCAATATGCAAATTGACCCTATAAAGTACAAGAGTATCACATCAGGGTTTGGAGTTTTATTGAAGGAGCAAGGAGCTAAAGGATTCTTCAGGGGATGGGTACCAACTTTGCTTGGTTACAGTGCTCAGGGAGCTTGCAAATTCGGATTTTATGAGTTCTTCAAGAAGTATTACTCAGATATTGCAGGACCAGAAAATGCAGTGAAGTACAAAACCTTCATATATCTAGCTGGTTCAGCTTCAGCAGAAGTGATTGCTGATATTGCACTTTGTCCAATGGAGGCAGTCAAAGTTCGTGTACAAACGCAGCCTGGCTTTGCTCAAGGTTTGGGAGATGGATTCCCCAAGTTTGTGAAGGCTGAGGGTGCTGGCGGGTTGTATAAAGGACTCGTTCCTCTTTGGGGCCGTCAGATTCCATACACAATGATGAAATTTGCATCATTTGAGACTATTGTGGAGATGCTGTACAAATATGCCATCCCAACCCCTAAAGAACAATGCAGCAAAAATAAACAGCTTGGAGTAAGTTTTGCAGCAGGATATGCAGCAGGTGTACTATGTGCAATTGTATCACACCCTGCTGATAACCTTGTTTCTTTTCTCAACAATGCCAAGGGTGCCACTGTTGGTGATGCTGTGAAGAAGATCGGATTACTTGGTCTTTTCACTCGTGGCCTTCCTCTTCGTATAGTTATGATTGGAACACTAACTGGGGCCCAGTGGGGACTCTATGATTCTTTCAAAGTATATGTAGGACTGCCTACAACTGGTGGAAGTGCTCCTACACCTACAAAGTAA 1077 0.4308 MAPSDYSLVPSFLYSSKSLSNLDNTSINTNHGLPPSHSSSLSSHVDRKNHIMIPAPKESIRMFSPAYYAACSAGGIFSCGLTHMAVTPLDLVKCNMQIDPIKYKSITSGFGVLLKEQGAKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPENAVKYKTFIYLAGSASAEVIADIALCPMEAVKVRVQTQPGFAQGLGDGFPKFVKAEGAGGLYKGLVPLWGRQIPYTMMKFASFETIVEMLYKYAIPTPKEQCSKNKQLGVSFAAGYAAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKIGLLGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVYVGLPTTGGSAPTPTK* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1494 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 66 150 IPR018108 -
Lan1g1494 358 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 4 358 IPR044677 GO:0005315|GO:1990547
Lan1g1494 358 PANTHER PHOSPHATE CARRIER PROTEIN 4 358 - -
Lan1g1494 358 SUPERFAMILY Mitochondrial carrier 68 338 IPR023395 -
Lan1g1494 358 Gene3D Mitochondrial carrier domain 67 343 IPR023395 -
Lan1g1494 358 Pfam Mitochondrial carrier protein 165 251 IPR018108 -
Lan1g1494 358 Pfam Mitochondrial carrier protein 69 152 IPR018108 -
Lan1g1494 358 MobiDBLite consensus disorder prediction 26 45 - -
Lan1g1494 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 264 343 IPR018108 -
Lan1g1494 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 163 247 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1494 Lan-Chr1 25169537 25174477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1494 7 356 Chloroplast and Mitochondria Gene Families AT5G14040 76.944 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1494 K15102 - gmx:100800530 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1494 1 25169537 25174477 Lan1g1494 1 25169537 25174477 ECH
Lan1g1906 1 34275110 34278649 Lan1g1494 1 25169537 25174477 LSH