Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1488 ATGAACAAGCTGAATTTTGTGAAAAATGGAATAAGCAAGTTGCCACCAGGTTTTCGTTTTCAGCCAACAGATGAAGAGCTTGTGTTTCAATACTTGAAATGTAAGGTCTTCTCATACCCATTGCCTGCTACTATAATTCCCGAGATCAATGTTTGCAAGTATGATCCTTGGGATTTGCCAGGAAACTGTGAAGAGAGGTACTTTTTCAGCTCAAAGGACAATAAGTATCGAAATGGTAATCGTATGAATCGAACAACCAACTCTGGCTATTGGAAAGCATCAGGAACAGACAAGAGAATCTCAACTTCAACATGTGATGGGATTGTTGGGATAAGAAAAAGTCTTGTTTTCTATGAAGGCAAATCTCCAAATGGGTCTAGAACTAATTGGGTGTTGCACGAATATCGCCTTGTCACTATAGAAAATAATTACGTGAACGAGATAGGAGATTGGGTTCTATGTCGCTTATTGATGAAGAAAAGAAGTATAATAGAAAGTGATGGTAGCACCAGTCACATGCATAAAAGAAACACAGCACGAGGTTTTCCAAGGTTGTTTGATTTTATGACGGTAAGCAATGGTGAACATTCTTCAACATCATCCTCATCATGTTCGAGTTCCAGCAATAACATAGAGGTGTCTTCAAATGCATTAGAACATGAGGAAACAAGTGGCTATGCTGATTTTTAA 690 0.3826 MNKLNFVKNGISKLPPGFRFQPTDEELVFQYLKCKVFSYPLPATIIPEINVCKYDPWDLPGNCEERYFFSSKDNKYRNGNRMNRTTNSGYWKASGTDKRISTSTCDGIVGIRKSLVFYEGKSPNGSRTNWVLHEYRLVTIENNYVNEIGDWVLCRLLMKKRSIIESDGSTSHMHKRNTARGFPRLFDFMTVSNGEHSSTSSSSCSSSSNNIEVSSNALEHEETSGYADF* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1488 229 SUPERFAMILY NAC domain 10 159 IPR036093 GO:0003677|GO:0006355
Lan1g1488 229 MobiDBLite consensus disorder prediction 197 229 - -
Lan1g1488 229 Gene3D NAC domain 23 164 IPR036093 GO:0003677|GO:0006355
Lan1g1488 229 ProSiteProfiles NAC domain profile. 14 159 IPR003441 GO:0003677|GO:0006355
Lan1g1488 229 MobiDBLite consensus disorder prediction 197 221 - -
Lan1g1488 229 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 229 - -
Lan1g1488 229 Pfam No apical meristem (NAM) protein 15 137 IPR003441 GO:0003677|GO:0006355
Lan1g1488 229 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1488 Lan-Chr1 25024806 25026806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1488 1 162 NAC Transcription Factor Family AT5G13180 61.963 3.51e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan1g1488 NAM 7.1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1488 - - gmx:100812015 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1488 1 25024806 25026806 Lan1g1488 1 25024806 25026806 ECH
Lan12g0750 12 14731553 14733063 Lan1g1488 1 25024806 25026806 LSH
Lan1g1912 1 34333937 34335813 Lan1g1488 1 25024806 25026806 LSH