Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1482 ATGGCAAATAAACTTGATATAAGGCAAGGAAAAACAACTCTTGTTCAACCTGCAAAAGAAACAGCAAAGGGTCACTTCTTCCTTTCAAACCTTGACCAGAATGTAGCAGTTCCAGTTCGCACCATTTACTGCTATAAACCCAGTTCTAGAGGCAATAACAATGATGCTGTGGAAGTCATAAAAACTTCTTTGTCAAAGGTTCTTGTTCACTATTACCCTTTAGCTGGAAGATTGGGTATAAGCTCAGAGGGTAAACTTGTAGTGAATTGCACTGGGGAGGGTGTTATTTTTGTTGAAGCTGAAGCGGATTCTATGATAGAGGATATTGGAGATATGAACAACCCTGACCTTGCTAATCTTGGGAAACTGGTTTATGATATACCTGGTGCAAGGAACATACTTGAGATACCTCCTCTAATAATTCAGGTGACAAAGTTCAAATGTGGAGGATTTATTTTGGGTGTAAACGTGAATCATTGCATGAATGATGGTTTGAGTGCTATGCAATTTCTGAATGCATGGAGCGAAACTGCCAGAAGAAGCATAGACTTAAAGATTCTACCATTTCTTGATAGAACCATCCTCAAAGCACGAAACCCACCAAAAATAGAGTTCCCACACCATGAATATGCTGAAATTAAAGATGTATCAAACACAAGTCACGATGTAAAAGAAAAAATGCTCAACAAGTATTTTCTTTTCACTCAGGAGAAGCTTAATCTGCTTAAGAAAAAAGCCACAGAAGATGGGGTTTTGAAGAAGTGCTCTAGTTTTGAAGCACTTTCAGCTTTTGTGTGGAGAGCTAGAACTGAAGCCTTAAGGATGCACCCTGATCAAGAAACTAAGCTACTTTTTGCTGTTGATGGAAGATCTAGGTTTGTGCCACCAATACCAGAAGGGTATTTTGGTAATGCTATTGTTTTGACAAATGCAATGTGCAAAGCAAATGAGTTACTGAAGAAGCCTTTTTCACATGCAGTAGGGTTAATTATCAATGCAATTAATATGGTCACAGATAGTTATATGAGATCTGCTATTGATTATTTTGAAGTTAAAAGAACAAGGCCTTCCTTAACTGCAACCCTTTTGATCACAACTTGGACTAGGTTGTCTTTTCACACTACAGATTTTGGTTGGGGTAAGCCTCAGTCTTTTGGTCCTGTGACATTGCCTGGGAAAGAAGTCATTTTGTTTTTGTCACATAGTGAAGATAAAAGAAGCATTAATGTTCTCGTGGGTTTGCCTGCACCTGCCATGAAAATATTTGAAGCACTTATGGAGATATATGAATAG 1293 0.3821 MANKLDIRQGKTTLVQPAKETAKGHFFLSNLDQNVAVPVRTIYCYKPSSRGNNNDAVEVIKTSLSKVLVHYYPLAGRLGISSEGKLVVNCTGEGVIFVEAEADSMIEDIGDMNNPDLANLGKLVYDIPGARNILEIPPLIIQVTKFKCGGFILGVNVNHCMNDGLSAMQFLNAWSETARRSIDLKILPFLDRTILKARNPPKIEFPHHEYAEIKDVSNTSHDVKEKMLNKYFLFTQEKLNLLKKKATEDGVLKKCSSFEALSAFVWRARTEALRMHPDQETKLLFAVDGRSRFVPPIPEGYFGNAIVLTNAMCKANELLKKPFSHAVGLIINAINMVTDSYMRSAIDYFEVKRTRPSLTATLLITTWTRLSFHTTDFGWGKPQSFGPVTLPGKEVILFLSHSEDKRSINVLVGLPAPAMKIFEALMEIYE* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1482 430 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 7 427 - -
Lan1g1482 430 Pfam Transferase family 11 427 - -
Lan1g1482 430 Gene3D - 210 427 IPR023213 -
Lan1g1482 430 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 427 - -
Lan1g1482 430 Gene3D - 2 209 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1482 Lan-Chr1 24877170 24880093 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1482 4 426 Monolignol Biosynthesis Gene Families AT5G48930 39.091 1.78e-96 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1482 K15400 - gmx:100775546 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1482 1 24877170 24880093 Lan1g1482 1 24877170 24880093 ECH