Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1477 ATGGAGAAACACGAATTAGTTTTATTCCCTAGCTCATCTACACCATCTTATGCTTCTGAAATTGATTTTGAAGTTGCTCAAAACTCTAAGGTTCATGTTAAAACAGAAGGTTTCTTAAGAACTGAAAAGAAGAAAATATCGAGCCAGAAAGGTTGTAAAAAGGAGCAGCATAGATATGTATTTGAAACAAGGAGTAAGATTGATATACTGGACGATGGGTACAAGTGGAGAAAGTATGGGGAAAAGATGGTGAAAAACAATAAGTTCTCCAGAAGTTACTACAGGTGCTCTTATGAAGGTTGCAATGTGAAGAAACAAATCCAACGCCATTCCAAAGATGAACAGGTTGTGGTAACAACCTATGATGGAATGCATATGCACCCTGTTGAGAAGTTGACTGAAAGCTTTGAGCAGATTTTGAGAAACTTTAACATTTACAATCAATTCTATAACCTTCAACGTTAG 465 0.3613 MEKHELVLFPSSSTPSYASEIDFEVAQNSKVHVKTEGFLRTEKKKISSQKGCKKEQHRYVFETRSKIDILDDGYKWRKYGEKMVKNNKFSRSYYRCSYEGCNVKKQIQRHSKDEQVVVTTYDGMHMHPVEKLTESFEQILRNFNIYNQFYNLQR* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1477 154 PANTHER WRKY FAMILY TRANSCRIPTION FACTOR 1 146 - -
Lan1g1477 154 SMART WRKY_cls 70 129 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan1g1477 154 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 146 IPR044810 GO:0003700
Lan1g1477 154 Pfam WRKY DNA -binding domain 71 128 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan1g1477 154 Gene3D WRKY domain 57 123 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan1g1477 154 ProSiteProfiles WRKY domain profile. 65 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan1g1477 154 SUPERFAMILY WRKY DNA-binding domain 63 129 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1477 Lan-Chr1 24786446 24787885 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1477 58 149 WRKY Transcription Factor Family AT5G13080 68.478 2.79e-46 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan1g1477 WRKY 1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1477 - - gmx:100127378 192.971