Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1456 ATGGCATCGAGTGAGGGATTTCTGACAGAAGGGCAGAGGGAAATGCTAAAAATTGCCAGTCAAAATGCGGACATTTTGTCTTCATCGCCAAAATCTCCATCGGCTTTGTTGTCTGAACATCATATAAAAGCTCCCACCGGTGGTAAGGCGCAAACTGCTGGGATTGCTGTGAGGCATGTGCGCCGATCACACTCAGGAAAGTTTGGGCGGGCGAAGAAGGATGGTGCTGGTGGTAAGGGCACTTGGGGAAAATTACTTGATACTGATGTTGCATCTCACATAGACAGGAATGATCCAAATTATGACAGTGGCGAGGAACCCTATCAGCTGGTTGGTTCTACTGTCACTGACCCGTTGGATGAATTCAAGAAAGCAGTGGTATCCATTATAGAAGAATATTTCAGTACTGGGTCCGTTGAACTGGCTGCATCTGACCTCAGAGAACTTGGCTCAAGTGAATATTATCCATACTTCATTAAGCGCCTTGTATCCATGGCTATGGACAGGCATGATAAGGAGAAAGAAATGGCTTCTGTTCTGCTCTCAGCTTTGTATGCTGATGTCATCAGTCCCGCGCAGATTAGGGATGGATTCTTTATGCTCATTGAATCTGCTGATGATCTTGCAGTGGACATACTGGACGCGGTTGACATCATTGCTTTATTCCTGGCACGTGCTGTTGTTGATGAGATCCTTCCTCCTGCCTTTCTAGCCAGGGCAAGGAAGGCTCTTCCAGAATCTTCCAAGGGTGTTCAGGTAATCCAGACTGCTGAGAAGAGTTATCTCTCAGCTCCACACCATGCTGAACTTGTGGAGAGACGATGGGGTGGTAGCACTCAAATCACTGTTGAGGAAGTAAAGAACAAGATTGCTGATCTACTTAAAGAATATGTGGATAGTGGTGACACACTTGAAGCTTGTAGGTGTATCCGTGAGTTGGGTGTTTCATTTTTCCATCACGAGGTTGTGAAGAGGGCTCTGGTACTAGCCATGGAGAACCGTTCTGCAGAACCTCTGATGTTGAAGCTATTAAAAGAAGCAGCAGAAGAAGGGCTCATCAGTTCAAGCCAAATGGTGAAAGGGTTTTCTCGTTTGGCAGATGGTCTGGATGATCTTGCTCTTGATATTCCATCAGCTAAAGCCTTGTTCCAGTCATTGGTTCCTAAAGCAATATCTGAAGGATGGCTTGATGCTTCATTCACGAAACCTGCTGGTGAAGATGGGGAAATTCAATTTAAAGATGAGAAGTTGAGGAAGTACAAATGGGAAGCTGTAACTATAATTCATGAGTATTTTCTGTCTGATGACATTCCTGATCTCATTCAGAGTCTTGAAGATCTTGGAGCACCTGAATATAACCCAATATTCTTGAAGAGGCTAATAACTCTTGCTATGGACAGAAAGAACAGAGAGAAGGAAATGGCATCTGTACTCCTTTCTGCTCTTCATATTGAGATATTCTCAACAGAGGATATAGTTAATGGTTTTCTCATGCTTCTGGAAAGTGCTGAAGATACAGCACTGGATATACTGGATGCTTCGAATGAGCTCGCACTGTTTTTAGCTCGGGCTGTGATTGATGATGTGTTGGCCCCTCTGAATCTGGAAGAAATTGGCAGCAGGTTACCACCAAAATGCAGTGGTAGTGAAACTGTGCTAATGGCTCGGTCACTCATTGCTGCTCGTCACGCTGGTGAGAGACTATTGAGATGCTGGGGTGGTGGGACTGGATGGGCTGTGGAGGATGCCAAGGACAAGATCATGAAGCTCTTAGAGGAGTACGAGAGTAGTGGGGTCTTGGGTGAAGCATGCCAGTGTATACGCGACCTGGGAATGCCTTTCTTTAACCATGAGGTAGTGAAGAAAGCTTTGGTTATGGCCATGGAGAAGAAGAATGATAGGATGCTATATCTACTTCAGGAGTGCTTTAATGAAGGTCTGATCACCATTAATCAGATGACTAAAGGGTTCACCCGTATTAAGGATAGTCTTGATGATCTGGCTTTGGACATTCCGAACGCAAAGGACAAATTTAGCTTCTATGTGGAACATGCCCAGACGAAGGGCTGGTTAGCTTCTTCCATCATATGA 2091 0.45 MASSEGFLTEGQREMLKIASQNADILSSSPKSPSALLSEHHIKAPTGGKAQTAGIAVRHVRRSHSGKFGRAKKDGAGGKGTWGKLLDTDVASHIDRNDPNYDSGEEPYQLVGSTVTDPLDEFKKAVVSIIEEYFSTGSVELAASDLRELGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPAQIRDGFFMLIESADDLAVDILDAVDIIALFLARAVVDEILPPAFLARARKALPESSKGVQVIQTAEKSYLSAPHHAELVERRWGGSTQITVEEVKNKIADLLKEYVDSGDTLEACRCIRELGVSFFHHEVVKRALVLAMENRSAEPLMLKLLKEAAEEGLISSSQMVKGFSRLADGLDDLALDIPSAKALFQSLVPKAISEGWLDASFTKPAGEDGEIQFKDEKLRKYKWEAVTIIHEYFLSDDIPDLIQSLEDLGAPEYNPIFLKRLITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFLMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIGSRLPPKCSGSETVLMARSLIAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESSGVLGEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLYLLQECFNEGLITINQMTKGFTRIKDSLDDLALDIPNAKDKFSFYVEHAQTKGWLASSII* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1456 696 Gene3D - 114 262 - -
Lan1g1456 696 Gene3D - 408 562 - -
Lan1g1456 696 PANTHER PROGRAMMED CELL DEATH PROTEIN 4-LIKE 1 693 - -
Lan1g1456 696 Gene3D - 570 696 - -
Lan1g1456 696 Gene3D - 272 404 - -
Lan1g1456 696 ProSiteProfiles MI domain profile. 419 540 IPR003891 -
Lan1g1456 696 SUPERFAMILY ARM repeat 579 695 IPR016024 -
Lan1g1456 696 SUPERFAMILY ARM repeat 119 279 IPR016024 -
Lan1g1456 696 Pfam MA3 domain 287 397 IPR003891 -
Lan1g1456 696 Pfam MA3 domain 122 233 IPR003891 -
Lan1g1456 696 Pfam MA3 domain 584 691 IPR003891 -
Lan1g1456 696 Pfam MA3 domain 424 530 IPR003891 -
Lan1g1456 696 PANTHER PROGRAMMED CELL DEATH 4 1 693 IPR039778 GO:0045892
Lan1g1456 696 ProSiteProfiles MI domain profile. 582 696 IPR003891 -
Lan1g1456 696 ProSiteProfiles MI domain profile. 121 242 IPR003891 -
Lan1g1456 696 SUPERFAMILY ARM repeat 282 403 IPR016024 -
Lan1g1456 696 SMART ma3_7 583 692 IPR003891 -
Lan1g1456 696 SMART ma3_7 420 531 IPR003891 -
Lan1g1456 696 SMART ma3_7 122 233 IPR003891 -
Lan1g1456 696 SMART ma3_7 286 397 IPR003891 -
Lan1g1456 696 SUPERFAMILY ARM repeat 418 576 IPR016024 -
Lan1g1456 696 ProSiteProfiles MI domain profile. 285 406 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1456 Lan-Chr1 24580135 24585126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1456 586 682 Eukaryotic Initiation Factors Gene Family AT5G57870 33.000 1.57e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1456 - - gmx:100809081 1197.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1456 1 24580135 24585126 Lan1g1456 1 24580135 24585126 ECH