Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1455 ATGGATGGTAGGAGGCATTCAGTTGATATTCCTATTTCTAAAACTCTTGTAGCATTGAGGAGGGTCAAGTCATTGAGGGATCCTTCAACTAATTGCATAAGCAAACTTTCTCCTTTGATTGATAATGTACATTGTGAATATGGTTCGGGTAATGGGATTTCGTCGTGGTTCTTGGATGCTTCTCATGCATGTGGTTCTGATCATGATGCTTTTTTAAGATCAAAGGATTCAGATTTTAAGGGGAAAAGAGAACACTATAGTACTGATTTTAGATTAGATAACTATTGTAGGGGCTCATGTAAGGAAAGGCCGAGAGACGATGAACCGGTTTACTATAATCCTAGTCCACAAGGCATTTTTGGAACTAAATTGTCAAATGAAAGCTGTTGTAGCAACCATGGGGGTGGAGGATTAGATTTAGCTTGCATCTTGTCTCCTATTAATCATTTGAGGAATGAGGAATCATGCCATTCATCAACTGTATTGTCATCACAGTTAGGGAGAACAGAGTACTCAAAGTCAAATACGAAGTCACTATTCAAGAATCAAGTGAAAAAATCAGAAGAGATGGGTGATATTGCAAGCCATGTAGGTAGTCCATGCCTTTCTCTTGGTGATGCTCTCTCAACGTGTAGCGCAGCAGCACATATAATTCAAGGTGTAAATGTTTTAGATAATCATAATGGGTGTAGGATAAGCTGTTGGTCAAAATCACCAAGTTTTGGAGAATCAAATCATTATTCTGAAATGGAAGACCTTCCTTTGACATTGCAGCATGTTAGTGAGACAGGTCTTAATGAACATAGAAGCATGAGACACATTGGTGGCGGAACTAGTACAAATTTGGAAACTCCTCGGAGTTTATGTATGAAATTCAGGCCAAAATCTTTCAGTGATTTGGTTGGACATAATGTGGTAGGAAGGTCTCTTTTGGGTGCTATCTCTAGAGGAAGAATAACATCTTTTTACCTCTTCCATGGTCCCCGTGGTACAGGCAAGACATCTGCATCCAGGATCTTTGCTGCTGCACTGAATTGCCTCTCTTTTGAGGAACAAAGGCCATGTGGTCTGTGTAGGGAATGTGTTTTGTTCTTTAATGGAAGAAGTAATGATATTAAGGAAGTGGATTTTTTGAGAATCAATCATGCAGACAAGGCTAAATCCCTTGTTAAGAATGCTTGCATACCTCCAGTTTCCTTGCGCTTTAAGGTGTTTATTATTGATGAGTGCCAGTTTTTGCATCGGGAAACATGGGTGATTCTTTTGAATAGTCTAGAGAATGTTCCCCAACATGTGGTTTTTGTGATGATCACTCCGGAATTGGATAAACTTCCTCGAAGTGCAGTCTCGAGGGCTCAAAGGTATTACTTTCCGAAGATTAAAGATACTGACATTGCAAGAAGATTGGAACAAATTTGTGTTGTCGAAGCTATTGATTATGAACAAGTTGCCTTGGACTTCATTGCTGCTAAATCATGTGGTTCTCTTAGGGATGCAGAAATGATGCTTGACCAACTGAGTTTGCTTGATAAAAAAATCACAATTTCCTTAGCTTATGAGCTTACTGGTGTTGTTTCTGATGAAGAATTGTTTGAATTGTTGGACCTGGCTTTGTCACCTGACACTTCAAATACAGTTATAAAAGCCCGGGAGCTTATGAGTTCACGGATAGATCCTCTACAACTTATGTCACAGCTGGAAAATCTTATAATGGATATTCTTGCAGGGAAATGTGAAGTTGGTGGTGCTGAAATTGGCAGAAGATTTTCTAGTAGACATACCTCGGAAGCAGACCTGCAGAAACTAAATCATGCAGTAAGAATACTTTCAGAAACAGAGAAGCAGTTAAGAATTTCAAAGAATCAAACAACATGGTTCACTGCAGCGCTTCTACAGCTAAACTCTGTAGAATATTCATCTGTGGATGCAAATGATAGCAAGTCATGTTTAAGAGTTGCGTCCACTCGAGATGGGGATTTCTGCAGTACATCATCTGAAGGAGAGAGTGTGAAGCATGCCGCTACTGAATTGCACGAGGATCGCAGAGGAACACTGGATTCGATATGGTATAGAGCTACAAAGATATGTCAATCTAGCAAGCTGAAGAATTTTCTCAGGAAGCATGGGAAGTTGTCTTCACTTTGGGTTAATCAAGGCCTTGCAGTTGCTGAGTTGGAATTTCATCATCGTGACTTTGTTGCTAGAGCTGAGAAGTCATGGAAACTGATTGCAAGTTCCCTGCAGTTTATATTGGGTTATAACATTGAGCTCAGGATCAATTATGTACCTTGTACTTCAGATTCAAAGTTTGCAAAATTTAAGAGGTCATATTTCAATTTCTTTAATTGTTCCCGCAGAATTCTACGGAAATCAGTGTCATATAATGAACAAGGGAGTGAATCTGACTATGCTGATTGTACCTCTGAAAAGCCTATAATGAAGGATCAAATTCTAACTTGTTCCTCTGATGCAATCAGCATAGTCAGATGA 2490 0.3936 MDGRRHSVDIPISKTLVALRRVKSLRDPSTNCISKLSPLIDNVHCEYGSGNGISSWFLDASHACGSDHDAFLRSKDSDFKGKREHYSTDFRLDNYCRGSCKERPRDDEPVYYNPSPQGIFGTKLSNESCCSNHGGGGLDLACILSPINHLRNEESCHSSTVLSSQLGRTEYSKSNTKSLFKNQVKKSEEMGDIASHVGSPCLSLGDALSTCSAAAHIIQGVNVLDNHNGCRISCWSKSPSFGESNHYSEMEDLPLTLQHVSETGLNEHRSMRHIGGGTSTNLETPRSLCMKFRPKSFSDLVGHNVVGRSLLGAISRGRITSFYLFHGPRGTGKTSASRIFAAALNCLSFEEQRPCGLCRECVLFFNGRSNDIKEVDFLRINHADKAKSLVKNACIPPVSLRFKVFIIDECQFLHRETWVILLNSLENVPQHVVFVMITPELDKLPRSAVSRAQRYYFPKIKDTDIARRLEQICVVEAIDYEQVALDFIAAKSCGSLRDAEMMLDQLSLLDKKITISLAYELTGVVSDEELFELLDLALSPDTSNTVIKARELMSSRIDPLQLMSQLENLIMDILAGKCEVGGAEIGRRFSSRHTSEADLQKLNHAVRILSETEKQLRISKNQTTWFTAALLQLNSVEYSSVDANDSKSCLRVASTRDGDFCSTSSEGESVKHAATELHEDRRGTLDSIWYRATKICQSSKLKNFLRKHGKLSSLWVNQGLAVAELEFHHRDFVARAEKSWKLIASSLQFILGYNIELRINYVPCTSDSKFAKFKRSYFNFFNCSRRILRKSVSYNEQGSESDYADCTSEKPIMKDQILTCSSDAISIVR* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1455 829 Gene3D - 279 458 IPR027417 -
Lan1g1455 829 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 287 633 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Lan1g1455 829 PANTHER DNA POLYMERASE III SUBUNIT GAMMA/TAU 102 813 - -
Lan1g1455 829 SUPERFAMILY post-AAA+ oligomerization domain-like 530 631 IPR008921 GO:0003677|GO:0006260
Lan1g1455 829 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 290 509 IPR027417 -
Lan1g1455 829 Pfam DNA polymerase III, delta subunit 308 460 - -
Lan1g1455 829 CDD HLD_clamp_pol_III_gamma_tau 460 523 IPR045085 -
Lan1g1455 829 CDD AAA 323 451 - -
Lan1g1455 829 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 102 813 - -
Lan1g1455 829 SMART AAA_5 319 479 IPR003593 -
Lan1g1455 829 Gene3D - 461 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1455 Lan-Chr1 24572581 24577771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1455 282 572 Core DNA Replication Machinery Family AT1G21690 22.635 3.06e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1455 - - lang:109357850 1659.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0793 12 15121517 15126410 Lan1g1455 1 24572581 24577771 LSH