Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1446 ATGGAGATGGAACGCGTATTTGAATTTCCTCACACTCACATGGATCGACGCCCAAGAAAGAGAGCGAGATTAGGCTGGGACATCCCTGAGGTCCCGAAGGCTCAGGTAGGATTGTTTTTTGGACAAGAGGTTGAGAATATTTCAAGCTATGCTCCTTCATTGGGTTCCTCAGAATATACCACTAGTTCTCTATTTGTTAAGGGAGTTGCTCGAAATGGTTCTCCCCCTTGGCGAGAAGATGACAAAGATGGGCATTACATGTTTGCGATTGGAGATAATTTAACATCTCGCTACAAGATTCATAGCAAAATGGGAGAAGGAACTTTTGGGCAGGTCTTGGAATGTTGGGACAGAGAAAAGAAGGAAATGGTTGCCATAAAAATTGTCCGTGGGATAAAGAAGTATCGTGAGGCAGCCATGATAGAAATTGAGGTATTGCAACAGCTTGGGAAACATGATAAAGGTGGCAATCGTTGTGTGCAATTACGGAACTGGTTTGACTATCGTAATCATATATGTATTGTGTTTGAGAAACTTGGACCAAGCTTATATGATTTTCTTCGGAAAAACAATTATCGCTCATTTCCCATTGATGTAGTCCGTGAGATTGGCAGACAACTATTGGAATGTGTAGCATTCATGCATGATTTGTCTATGATCCATACTGACCTGAAACCTGAAAACATACTTCTGGTATCACCAGAGTATGTCAAAGTTCCTGACTACAAGAGTTCATCCAGATCACCAAGTTCCTATTTCAAAAGAGTGCCCCAATCTAGTGCTATAAAGGTTATTGATTTTGGCAGTACCACTTATGAGAGAAAGGATCAGAATTACATTGTATCGACCCGCCATTATAGGGCACCTGAAGTTATTCTTGGACTTGGATGGAGTTATCCATGTGATGTATGGAGTGTGGGATGTATACTGGTTGAGTTATGCACGGGTGAAGCTTTGTTTCAGACTCATGAGAATTTAGAGCACCTTGCCATGATGGAGAGGGTGCTTGGTGCATTACCACAGCACATGTTAAAGAGAATTGACCGACATGCGGAGAAGTATGTTAGAAAGGGTAGATTAGACTGGCCAGAGGGTGCAACCTCAAGGGACAGCATTAAAGCCGTGATGAAGCTTCCTAGGCTACAGAACCTTATAATGCTGCACGTGGATCATTCAGCTGGTGATCTTATACATCTCTTGCAGGGGTTACTTAGGTTTGACCCCTCTGAGAGACTTACTGCTAAGGAAGCTCTCCGACATTCTTTCTTTAGAGACCACCTTAGGAGATAA 1290 0.4264 MEMERVFEFPHTHMDRRPRKRARLGWDIPEVPKAQVGLFFGQEVENISSYAPSLGSSEYTTSSLFVKGVARNGSPPWREDDKDGHYMFAIGDNLTSRYKIHSKMGEGTFGQVLECWDREKKEMVAIKIVRGIKKYREAAMIEIEVLQQLGKHDKGGNRCVQLRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDVVREIGRQLLECVAFMHDLSMIHTDLKPENILLVSPEYVKVPDYKSSSRSPSSYFKRVPQSSAIKVIDFGSTTYERKDQNYIVSTRHYRAPEVILGLGWSYPCDVWSVGCILVELCTGEALFQTHENLEHLAMMERVLGALPQHMLKRIDRHAEKYVRKGRLDWPEGATSRDSIKAVMKLPRLQNLIMLHVDHSAGDLIHLLQGLLRFDPSERLTAKEALRHSFFRDHLRR* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1446 429 Pfam Protein kinase domain 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1446 429 Gene3D Phosphorylase Kinase; domain 1 85 178 - -
Lan1g1446 429 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 429 - -
Lan1g1446 429 ProSiteProfiles Protein kinase domain profile. 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1446 429 SUPERFAMILY Protein kinase-like (PK-like) 85 426 IPR011009 -
Lan1g1446 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Lan1g1446 429 CDD PKc_CLK 85 423 - -
Lan1g1446 429 PANTHER KINASE AFC1 1 429 - -
Lan1g1446 429 Gene3D Transferase(Phosphotransferase) domain 1 152 423 - -
Lan1g1446 429 SMART serkin_6 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1446 Lan-Chr1 24387390 24390982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1446 103 425 Core Cell Cycle Gene Families AT1G76540 25.519 4.20e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Lan1g1446 Pkinase 5.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1446 K08287 - gmx:100804452 819.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1446 1 24387390 24390982 Lan1g1446 1 24387390 24390982 ECH