Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1445 ATGGAGATAAGGTTTAATGAAGATATTATTTCCCAAGATGATCAAATGCAGATAATGGAAGAGATGGATGAACAAGTGCAATCCCGAGTTCAAGAAATTTTTGAAAAGAGTGAAGCCCCACATGTCGGTATGACATTTACAACTGATAAAGTAGCTTATGATTTTTATAATTCATTTGCATTCAGAGAAGGTTTCTCCATTAGGAAGAATTGGAATTATAAAGCAAGGAATACCGAAATAGTCATAAAGTATCACTTTGTTTGCAATAAAGAAGGATTTAAAAGGCTAGATAAGAGATTGTTAGGAGAAGAAGTAAAACGTCGTCGAGATGAAAGGGAAGGTTGCAAGGCTCATATGCACATTGAAAAGACAAAAGGAGACTGA 384 0.3464 MEIRFNEDIISQDDQMQIMEEMDEQVQSRVQEIFEKSEAPHVGMTFTTDKVAYDFYNSFAFREGFSIRKNWNYKARNTEIVIKYHFVCNKEGFKRLDKRLLGEEVKRRRDEREGCKAHMHIEKTKGD* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1445 127 Pfam FAR1 DNA-binding domain 54 125 IPR004330 -
Lan1g1445 127 PANTHER FAR1 DNA BINDING DOMAIN, FHY3/FAR1 FAMILY-RELATED 17 125 - -
Lan1g1445 127 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 17 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1445 Lan-Chr1 24382336 24382719 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lan1g1445 FAR1 4.2e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1445 - K17604 lang:109363378 263.462