Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1435 ATGGAACACAAACCCACACCTACTACTGTTAAGTTCCTCTATAGCTACGGCGGAAAAATCCTCCCACGCGCCACCGACGGCGTACTCCGTTACTCCGGCGGCCATACCAGAGTCCTTACTGTCGATCCTTCTATGTCTTTCTCAGAGTTGATGGTAAAGCTTAATGAATTGTGTGGTTCCTCCTCAATAACCTTGAAGTGTCCTTTACCTAATGGAAACTTGGAGACCTTGATTTCGATCACCAGCGACGAAGATTTGGCCAATATAATTGAGGAATACGATCGAGTTTCGTTGCTGTTAAGTCATCCGTTGAAAATCAGAGCCATTCTTTCGCCGTTGAAGAAACTATCTTCTTCACCGTCTTCTTCATCCTACGCCACGCACTCTTCCTCTGGATCGCCTCACTCCTCCGCCGAGTCACCGCCGTATGCGGCGGGGCGTCAGTTTTTTTCGCCGGAATTGCCGCAGGCGTTGTATCCAGTTGGTGGCGGTTACGGATCGGTGAAAGATTCTTGGTACCCTCGTCAATTTGGAAGCCCTAGGATCCTCTATCGTGGACCTCACTCTTATAATTACTGCCAGTGA 585 0.4906 MEHKPTPTTVKFLYSYGGKILPRATDGVLRYSGGHTRVLTVDPSMSFSELMVKLNELCGSSSITLKCPLPNGNLETLISITSDEDLANIIEEYDRVSLLLSHPLKIRAILSPLKKLSSSPSSSSYATHSSSGSPHSSAESPPYAAGRQFFSPELPQALYPVGGGYGSVKDSWYPRQFGSPRILYRGPHSYNYCQ* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1435 194 SMART PB1_new 24 113 IPR000270 GO:0005515
Lan1g1435 194 Gene3D - 30 111 - -
Lan1g1435 194 Pfam PB1 domain 29 100 IPR000270 GO:0005515
Lan1g1435 194 MobiDBLite consensus disorder prediction 115 138 - -
Lan1g1435 194 MobiDBLite consensus disorder prediction 115 142 - -
Lan1g1435 194 SUPERFAMILY CAD & PB1 domains 26 114 - -
Lan1g1435 194 CDD PB1_UP2 15 97 - -
Lan1g1435 194 PANTHER PB1 DOMAIN PROTEIN 1 193 - -
Lan1g1435 194 PANTHER OS05G0427100 PROTEIN-RELATED 1 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1435 Lan-Chr1 24205374 24206706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1435 7 96 MAP Kinase Kinase Kinase AT5G57610 44.444 9.02e-21 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1435 - - gmx:100810563 196.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1435 1 24205374 24206706 Lan1g1435 1 24205374 24206706 ECH
Lan1g1435 1 24205374 24206706 Lan1g1948 1 34743713 34744748 LSH
Lan1g1435 1 24205374 24206706 Lan15g0620 15 13947612 13948675 PCT
Lan15g0620 15 13947612 13948675 Lan1g1435 1 24205374 24206706 PCT