Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1431 ATGGCATCATCCAGCTCTTACAATTCTCCCTGTGCTGCCTGCAAATTCTTGAGGAGGAAATGCATGCCAGGATGCATCTTTGCGCCTTACTTCCCACCAGAAGAGCCTCAAAAATTTGCTAATGTCCACAAAATCTTTGGTGCTAGCAATGTCACAAAGCTCCTTAATGAACTCCTTCCTCACCAGAGAGAGGATGCAGTGAATTCCCTTGCCTATGAAGCAGAGGCTCGTGTGAGGGACCCAGTTTATGGCTGCGTTGGTGCCATTTCATTCCTCCAGAGACAAGTTCAGAGGCTCCAGAAGGAGCTTGATGCTGCAAATGCTGATTTGCTTCGCTATTCTTTCAGTGACATTCCTTCTGCAGCAATTTCTGTTCCTCCAGGACTTACTTCTCTTCAACAAATTCCACAAAGGGGGTTCAGTGCAAGAATTGGTAATGAAGGAAGTGGATTTTATCTCCAAACTCCAAATACTGCTTATTCTTTTCCTTATTCTCTTCCTTGGAATGATAACTTTCCAGAGGACATAAGTGAGGGTGGAGGAGGAGGTAATTTGTGA 558 0.448 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRYSFSDIPSAAISVPPGLTSLQQIPQRGFSARIGNEGSGFYLQTPNTAYSFPYSLPWNDNFPEDISEGGGGGNL* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1431 185 Coils Coil 89 109 - -
Lan1g1431 185 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Lan1g1431 185 PANTHER ELONGATED PETIOLULE 1 1 184 - -
Lan1g1431 185 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Lan1g1431 185 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1431 Lan-Chr1 24122006 24124091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1431 1 185 AS2 family AT5G63090 64.103 1.63e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan1g1431 LOB 2.8e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1431 - - gmx:100803667 323.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1431 1 24122006 24124091 Lan1g1431 1 24122006 24124091 ECH