Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1416 ATGCAGAGTTCTACTTTCACTGTTTCTCCTTCTCTCTTTGTTTATCACCAAAAACTTCGTAACCGCTTCCACCCTTTACGTTTTCAACCTTCCAAAACCAACGTTAATATCTCTTCTTCTTCTTCTTCTTCTCCCTCTCTGAAACCATGGTCTCTTGCTTCTTCTTCTTCTTCTTCTTTCAAACTCAGGCCATGGACATCCCTCAATCGCTTTCAGGCCAAAGCTACCTCCGTACCGGAGAGTGCCGGAGACGCCGCTTCTGATAACGGCGCTCTATTCAGAACTCTTGAACTTGGAGCTTTGTTTGGCATGTGGTTCATATTCAACATCTATTTCAATATCTATAATAAACAGGTCTTGAAGGTGTACCCATTTCCACTAACTATCACTGCAGTTCAATTTGCCATTGGAACTGTAATTGTATCATTGATGTGGGGTTTAAATCTCTATAAGAGGCCTAAGATCAGTAATGCTCAGCTTGCAGCAATATTGCCACTAGCTATGGTGCATACTTTAGGGAACCTTTTCACCAATATGAGTCTTGGAAAGGTTGCTGTGTCTTTTACTCATACAATCAAAGCTTCCGAGCCTTTCTTTTCGGTCATCCTTTCTGCTATGTTCCTCGGAGAGATGCCTACTGCATGGGTGGTTGCTTCCCTTGTTCCTATTGTTGGTGGAGTGGTATTGGCATCTGTTACAGAGGCATCTTTTAATTGGATTGGATTTTGGAGTGCAATGGCTTCCAATTTGACAAACCAATTTCGCAATGTTCTTAGCAAAAAAGTCATGGTTAAGAAGGAGGATTCTATCGACAACATAACCCTCTTCTCAATAATAACAGTTATGTCCTTCTTGTTGTCTGCTCCTGTAACTATCTTCGCCGAGGGTGTCAAATTTACCCCTTCTTATCTGCACGCCGCTGGATTAAATGTTAAACAAGTATATATCAGATCTCTTCTTGCTGCACTATGTTTCCATGCATATCAACAAGTTTCTTATATGATACTACAAAGAGTATCACCTGTTACCCACTCTGTAGGAAATTGTGTGAAGCGGGTTGTGGTTATTGCCAGCTCTGTCCTCTTCTTCAAAACACCTGTTTCACCTGTTAATGCATTTGGAACTGCTATAGCTCTTGCAGGTGTTTTCCTTTATTCTAGGGTGAAGAGAATTAAGGCAAAGACAACTTAA 1191 0.4114 MQSSTFTVSPSLFVYHQKLRNRFHPLRFQPSKTNVNISSSSSSSPSLKPWSLASSSSSSFKLRPWTSLNRFQAKATSVPESAGDAASDNGALFRTLELGALFGMWFIFNIYFNIYNKQVLKVYPFPLTITAVQFAIGTVIVSLMWGLNLYKRPKISNAQLAAILPLAMVHTLGNLFTNMSLGKVAVSFTHTIKASEPFFSVILSAMFLGEMPTAWVVASLVPIVGGVVLASVTEASFNWIGFWSAMASNLTNQFRNVLSKKVMVKKEDSIDNITLFSIITVMSFLLSAPVTIFAEGVKFTPSYLHAAGLNVKQVYIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIASSVLFFKTPVSPVNAFGTAIALAGVFLYSRVKRIKAKTT* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1416 396 PANTHER SOLUTE CARRIER FAMILY 35 47 371 - -
Lan1g1416 396 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 96 394 IPR004696 GO:0016021|GO:0022857|GO:0055085
Lan1g1416 396 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 47 371 - -
Lan1g1416 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 311 389 - -
Lan1g1416 396 Pfam Triose-phosphate Transporter family 97 386 IPR004853 -
Lan1g1416 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1416 Lan-Chr1 23900825 23905384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1416 1 394 Antiporters AT5G33320 68.873 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1416 K15283 - qsu:112040756 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1416 1 23900825 23905384 Lan1g1416 1 23900825 23905384 ECH
Lan1g1416 1 23900825 23905384 Lan1g1959 1 34844512 34848582 LSH
Lan1g1416 1 23900825 23905384 Lan15g0634 15 14430984 14434606 PCT
Lan15g0634 15 14430984 14434606 Lan1g1416 1 23900825 23905384 PCT