Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan1g1408 | ATGAAGGAAAACAGTGATGGGTTTGTGAGGGCAGATAAGATTGATTTGAAGAGCATAGATGAACAACTAGAGAGGCATCTGAACAAGGTTTTGACATTGGAGAAGAAAAAGCACATAGAGGAGGAAGATGGTAATCGTGTTCAAATACACAGTGGCAGTGCCAGTAATTCTCCTATTGCTGCTACTAAATTTAGAAGTCCCTTCAAGAAGCAGAGACAGGAGTGGGAGATTGATCCTTCTAAACTGATTATTAAGAGTGTTATAGCTCGTGGCACTTTTGGAACAGTGCACCGTGGTATCTATGATACTCAAGATGTTGCTGTTAAATTGCTGGACTGGGGTGAAGAAGGCCAAAGAACTGAAGCTGAAGTTGCTTCTCTGAGGGCAGCATTTATACAGGAAGTTGCTGTTTGGCATAAACTCGATCATCCTAATGTCACTAAGTTCATAGGAGCAACAATGGGGTCTGCAGAATTACAGATACAAACTGACAACGGTCTAATCGGCATGCCAAGCAACGTTTGTTGTGTTGTTGTGGAATATCTTCCTGGAGGTACACTGAAAAATTTCCTAATAAAGAACAGGAAGAGGAAGTTAGCTTTTAAGGTTGTCATCCAGCTTGCACTTGATCTCGCGAGAGGGCTGAGTTATCTTCACTCTCAAAAGATTGTCCATAGAGATGTAAAGACAGAGAACATGCTGTTGGATAAGTCACGCACGGTTAAAATTGCTGATTTTGGGGTTGCTCGTGTTGAGGCATCAAATCCTAATGATATGACCGGGGAGACTGGCACTCTTGGTTACATGGCTCCAGAGGTTCTAAATGGCAACCCCTATAACAGGAAATGTGATGTGTACAGTTTTGGCATCTGTTTATGGGAAACATATTGTTGCGACATGCCATATCCTGACTTAAGTTTCGCAGAAGTTAGTTCAGCCGTTGTTCGCCAGAATCTGAGACCAGAAATGCCAAGATGTTGTCCAAGTTCTCTAGCAAATGTAATGAAGAAATGCTGGGATGCTAGTCCTGATAAGCGGCCGGAGATGGATGAGGTAGTTTCCATGCTCGAGGCCATTGACACTTCCAAGGGTGGCGGTATGATCCCTCCGGATCAGCAGGAGGGTTGTCTTTGCTTCCGCAAACGTAGAGGGCCTTAA | 1158 | 0.4378 | MKENSDGFVRADKIDLKSIDEQLERHLNKVLTLEKKKHIEEEDGNRVQIHSGSASNSPIAATKFRSPFKKQRQEWEIDPSKLIIKSVIARGTFGTVHRGIYDTQDVAVKLLDWGEEGQRTEAEVASLRAAFIQEVAVWHKLDHPNVTKFIGATMGSAELQIQTDNGLIGMPSNVCCVVVEYLPGGTLKNFLIKNRKRKLAFKVVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKSRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWETYCCDMPYPDLSFAEVSSAVVRQNLRPEMPRCCPSSLANVMKKCWDASPDKRPEMDEVVSMLEAIDTSKGGGMIPPDQQEGCLCFRKRRGP* | 386 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan1g1408 | 385 | Gene3D | Phosphorylase Kinase; domain 1 | 70 | 165 | - | - | |
Lan1g1408 | 385 | SMART | serkin_6 | 82 | 359 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan1g1408 | 385 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 223 | 235 | IPR008271 | GO:0004672|GO:0006468 | |
Lan1g1408 | 385 | PRINTS | Tyrosine kinase catalytic domain signature | 179 | 192 | IPR001245 | GO:0004672|GO:0006468 | |
Lan1g1408 | 385 | PRINTS | Tyrosine kinase catalytic domain signature | 217 | 235 | IPR001245 | GO:0004672|GO:0006468 | |
Lan1g1408 | 385 | PRINTS | Tyrosine kinase catalytic domain signature | 283 | 305 | IPR001245 | GO:0004672|GO:0006468 | |
Lan1g1408 | 385 | PRINTS | Tyrosine kinase catalytic domain signature | 327 | 349 | IPR001245 | GO:0004672|GO:0006468 | |
Lan1g1408 | 385 | PANTHER | DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED | 1 | 379 | - | - | |
Lan1g1408 | 385 | CDD | STKc_MAP3K-like | 88 | 356 | - | - | |
Lan1g1408 | 385 | Pfam | Protein tyrosine and serine/threonine kinase | 84 | 356 | IPR001245 | GO:0004672|GO:0006468 | |
Lan1g1408 | 385 | Gene3D | Transferase(Phosphotransferase) domain 1 | 182 | 369 | - | - | |
Lan1g1408 | 385 | Coils | Coil | 16 | 36 | - | - | |
Lan1g1408 | 385 | ProSiteProfiles | Protein kinase domain profile. | 82 | 359 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lan1g1408 | 385 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 1 | 379 | - | - | |
Lan1g1408 | 385 | SUPERFAMILY | Protein kinase-like (PK-like) | 58 | 356 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan1g1408 | Lan-Chr1 | 23816867 | 23823212 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan1g1408 | 1 | 317 | MAP Kinase Kinase Kinase | AT5G50000 | 80.251 | 0.0 | 536 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL-Pl-4 | Lan1g1408 | PK_Tyr_Ser-Thr | 2.6e-63 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan1g1408 | - | - | gmx:100807921 | 689.493 |