Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1404 ATGAGACTGAGACAGTGTTTGATGGAATGGACACCATTTGCAGCCATGGTGATAGTGGAGTGCCTTGATGTAGGGTTGACCACAATGAGCAAAGCAGCCATGTCCAAAGGAATGAACCACTTCACCTTTGTGGTCTATTCTAATGCCCTTGCTACTCTCATACTCATCCCTTCATCTTTCTTCATAAAAAGAATAACAAGGACACCCCTTTCTTTCTCACTTCTCTGCAAATTCTTCCTCCTCGGCCTTATTGGCATAACTATAATGCAGAATTGTGTTTTCACGGGCATAAGCTACAGCTCCCCCACTCTTGGATCTGCTATGAGCAACTTGGTTCCAGCAATCACTTTTATACTAGCAGTCACCTTCAGGATGGAGAAGTTGGATATTAGAAGCTCAATAAGCCAGATAAAAATCATTGGCATAGTGCTTTCAATCTCAGGAGCATTACTTGTGACACTATACAAAGGAGCTCCAATTGGGGGCATTCAAATTCAAGATCAACCCTCACCATCACAACCATTCCCATCTGTGTTGTTGGCACAAACTGATAACTGGGTCATTGGGGGTCTCTTCCTTGGCACAGCTTCTCTGTCTCTTGCACTGCAGAATATTGCTCAGGCAGCAATTGTTAAAGAATATCCATCTCAACTGACCATAGTAGCCTTCTATTGCCTGTTTGGAACCATCCAATGTGCAATAATTTCTCTGATTGCAATCAGAGATCCAAATGCCTGGAAACTAAGGACTGGCATTGAGCTTATCTCTATATTCTATTCGGCAATTTTCGGAAGTGTGGTGACATTTTCCGTACTGACTTGGTGCATAGATAAGAAAGGACCTGTATTTGTTACCATGTTCAAGCCTCTCGGGATTGCCATTGCTGCATTTACGAGTGCTTTGTTCCTTGGTGATACACTACATGTCGGGAGTGCCATCGGCTCACTAGTAATCATTTTTGGAGTCTACACAGTACTGTGGGCACAGTCCAAAGAAGAGAATGCCAAAGCCAGAGTTGATAGACTATCACCCTCATCAGAACAAGAGAGCCCTCTACTAGGGTCACCCTGA 1071 0.437 MRLRQCLMEWTPFAAMVIVECLDVGLTTMSKAAMSKGMNHFTFVVYSNALATLILIPSSFFIKRITRTPLSFSLLCKFFLLGLIGITIMQNCVFTGISYSSPTLGSAMSNLVPAITFILAVTFRMEKLDIRSSISQIKIIGIVLSISGALLVTLYKGAPIGGIQIQDQPSPSQPFPSVLLAQTDNWVIGGLFLGTASLSLALQNIAQAAIVKEYPSQLTIVAFYCLFGTIQCAIISLIAIRDPNAWKLRTGIELISIFYSAIFGSVVTFSVLTWCIDKKGPVFVTMFKPLGIAIAAFTSALFLGDTLHVGSAIGSLVIIFGVYTVLWAQSKEENAKARVDRLSPSSEQESPLLGSP* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1404 356 Pfam EamA-like transporter family 24 153 IPR000620 GO:0016020|GO:0016021
Lan1g1404 356 Pfam EamA-like transporter family 189 326 IPR000620 GO:0016020|GO:0016021
Lan1g1404 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Lan1g1404 356 PANTHER WAT1-RELATED PROTEIN 8 349 IPR030184 GO:0016021|GO:0022857
Lan1g1404 356 PANTHER WAT1-RELATED PROTEIN 8 349 - -
Lan1g1404 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1404 Lan-Chr1 23794652 23796740 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1404 12 353 Nodulin-like Gene Family AT5G40240 43.266 1.44e-85 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1404 - - ccaj:109809148 481.485