Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1399 ATGTCGAATAAGAGGCGCCCAGAAGAGGGAAAACCCAAATACGATTTTGCTGACGATAAACGTAGAAAGGCTCCTTCATTCTCCAGCGTGGTGCGCGAGGTGATGAAGTTACAATCAGTCAGGAATTTGCTGGAGCCAATTCTAGAGCCCTTGCTTCGTCGAGTGGTTAGGGAGGAAGTTGAATTGGCCCTAAGGAAGCATCTAACCAGCATGAAACAGACCAGTGGAAAGGAGATGCATATTATTGAATCAAGAAGCTTGCAGCTGCAGTTTGAAAATAGCATTTCCCTTCCTGTCTTTACCGGAGCTCGAATAGAAGGAGAGGATGGTTCAAACTTGAGAATTGGTTTAGTTGATGCCATAACAGGGAAGGTTGTTAGGTCTGGGCCTGAATCTGTAGCTAAGGTGGAAATTATAGTCCTTGAGGGTGATTTTGAAGATGAAAGTGATAATTGGATGCCTGGAGAATTCAAGAGCAATATTATTAGAGAGAGGGAAGGGAAAAAAGCCCTCCTTACAGGAGATGTAATTTTATATCTAAAAGATGGGACTGGTATGGTGGGTGAAATTTCATTTACAGATAATTCAAGCTGGACAAGGAGCCGCAGGTTCAGGCTTGGGGCAAGAGTTGTGGGCAACTTCAATGGCATTATAATAAGAGAAGCAAAGACAGGGTCGTTTGTAGTCAGGGATCATCGAGGAGAATTGTACAAGAAGCACCACCCTCCTAGTTTGTCTGATGAAGTTTGGAGATTGGAAAAGATAGGCAAGGATGGAGCTTTCCACAAACGTTTGAGTCGGGAAAAGATCCGTACTGTTGAAGATTTTCTCACACTTCTCAATCGGGATCCAGCAAAGTTACGCAGTATACTGGGCACAGGTATGTCTACAAAGATGTGGGAAGTAACTGTGGAGCATGCTCGAACTTGTGTACTTGAATCGACGAGGCACCTGTACTTCCCTCCTCATTCTCAACAGAAAACTGGTATAATCTTCAATGCCGTGGGACAATTGACCGGACTACTCTCCGAATGTGAGCATGTCCCTGTAGATAAGCTGTCCGAAACTGAAAAGGCTGAAGCTCAAAGCTCAGTTATTTCTGCATTTAAACAAGGGGAGAATGTTTCCACTTTTGAAGATGAAGTCTCTCTTATGGATGTCTCTTCAAACTTAACTAATGCACTCTACTCCCCAAGATCACTAAAGACTGAGGTATCCAGTGGCAACAAGCTTTTCGTTCCTCAAAAGGCCGGAGTAGGATTCAATTATGCACAAGCAAGTGCCTCTTCTCCAGATATCATGTCATCCATTTATTCTATTGGCGGAATTAGCAGCTTCGATGACTATGTCTTGCCTAATTTTGACAGCATGGGGCTTAGATATGATCAGACTCTTAGTTTTCCTGACCAACTCACCAACTCTTTGGCCTGTGAAACCGATTCAACGGCCCCTGCGTTTACTGATGAAGACCATATGCAATTTTTTGATAATGACATTCACTTTCAGTGTCACATTCAAGCAGATTTACAGAGTGCTATTGATGGCTTCATGTTGGGACGCACGTCGAATGCCACTGGTAAAGCTCAGAAGAGATGGAGAAAGATATTCAATGTCCTAAAATGGTTCATGGTTTGGAAAGGAGTAAAATGCAGGTAG 1656 0.4336 MSNKRRPEEGKPKYDFADDKRRKAPSFSSVVREVMKLQSVRNLLEPILEPLLRRVVREEVELALRKHLTSMKQTSGKEMHIIESRSLQLQFENSISLPVFTGARIEGEDGSNLRIGLVDAITGKVVRSGPESVAKVEIIVLEGDFEDESDNWMPGEFKSNIIREREGKKALLTGDVILYLKDGTGMVGEISFTDNSSWTRSRRFRLGARVVGNFNGIIIREAKTGSFVVRDHRGELYKKHHPPSLSDEVWRLEKIGKDGAFHKRLSREKIRTVEDFLTLLNRDPAKLRSILGTGMSTKMWEVTVEHARTCVLESTRHLYFPPHSQQKTGIIFNAVGQLTGLLSECEHVPVDKLSETEKAEAQSSVISAFKQGENVSTFEDEVSLMDVSSNLTNALYSPRSLKTEVSSGNKLFVPQKAGVGFNYAQASASSPDIMSSIYSIGGISSFDDYVLPNFDSMGLRYDQTLSFPDQLTNSLACETDSTAPAFTDEDHMQFFDNDIHFQCHIQADLQSAIDGFMLGRTSNATGKAQKRWRKIFNVLKWFMVWKGVKCR* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1399 551 Pfam Calmodulin binding protein C-terminal domain 317 376 IPR046829 -
Lan1g1399 551 Pfam Calmodulin binding protein-like N-terminal domain 87 232 IPR046831 -
Lan1g1399 551 PANTHER CALMODULIN-BINDING PROTEIN 60 A 1 547 - -
Lan1g1399 551 Pfam Calmodulin binding protein central domain 244 310 IPR046830 -
Lan1g1399 551 MobiDBLite consensus disorder prediction 1 21 - -
Lan1g1399 551 PANTHER OS02G0177800 PROTEIN 1 547 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1399 Lan-Chr1 23740174 23744036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1399 1 359 Calmodulin-binding Proteins AT5G62570 60.111 6.50e-154 444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1399 1 23740174 23744036 Lan1g1399 1 23740174 23744036 ECH
Lan1g1399 1 23740174 23744036 Lan1g1977 1 34963808 34968569 LSH