Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1387 ATGGGGTCCACATCTCAATCTCAGAAGAAAAACCTTCACTCTCTCTTACTCACTAACCTCACAATCCCTTCATCTTCTTCTCCTTCTTCCTCAAACAACGACCTTGATTTCGATTTCTCCCATGTTTTCGGTCCCAACCCTTCTCCATCTCCCTCCACCAATGTCCCAACCCCTCACATCATTCACAACAGGTCCCACTCCTTTGTGGGTCCCTCTCCTCGCTTACCCACTTCACTTTTCCCTCTCCCGGAACTCGCTTCTGATTCAGAACCTGATGATGATGAAATTGAAAAGCGTGTGTTTGAAGAGGAGAAAGTGGTCCCCACCCATGAGGGAAAAATTGGACCTTTGGATTTTCTTATAGTGAGAATGGTGGGACAAGGTTCCTTTGGGAAAGTGTTCTTAGTTAGGAGGAAAAAGGGTGATGATTGTTTAGAAGGGGATGGAGTTTTTGCAATGAAGGTGATGAAGAAAGATACTATTATTAAAAAGAATCATGTTGATTATATGAGAGCTGAGCGAGATATTCTCACTAAAGTTGTTCATCCTTTCATTGTTCAGCTCCGTTACTCTTTCCAGACCAAATCTAAACTATATTTGATCTTGGACTTCATTAATGGAGGGCATCTCTTCTTTCATCTATATCGGCAGGGTATCTTCAGTGAGGACCAGGCAAGGATTTACACTGCTGAGATAGTATCTGCTGTTTCACATCTTCACAAGAACGGCATCGTGCATCGGGATCTTAAACCTGAAAATATACTTATGGATGCTGATGGGCATGTGATGCTAACTGATTTTGGACTGTCAAAAGAAATTGACGAAATGGGCAGATCCAACTCTATGTGTGGGACCACAGAATATATGGCTCCAGAAATTTTACTGGGTAAAGGCCATAACAAGAATGCAGATTGGTGGAGTGTTGGTATTCTGTTGTATGAAATGCTATCAGGGAAGCCACCATATACACACACCAACAGAAAGAAGCTTCAGGAGAAAATTATTCACGAGAAATTTAAACTTCCACCATTCCTTACCAGTGAAGCTCACTCTTTGCTCAAAGGATTGCTGCTAAAGGATCCATCGACAAGGTTTGGCAGTGGGCTGAATGGAGATGAGCAGATCAAAAGTCATAAATGGTTTCGGTCAATCAATTGGAAGAAATTGGAGGCAAGGGAACTGCAACCGAAGTTCAAACCAGATGTGTTTGGAAAAGAATGTACGGCTAATTTTGATCAATGCTGGACAGAAATGCCTCCTAATGACTCACCAGCATCCACACCTACAGCCGGTGATCATTTCCAGGGATATACTTATGTGGCACCAAACCCATGGCTTCCATCTGGATAG 1350 0.4274 MGSTSQSQKKNLHSLLLTNLTIPSSSSPSSSNNDLDFDFSHVFGPNPSPSPSTNVPTPHIIHNRSHSFVGPSPRLPTSLFPLPELASDSEPDDDEIEKRVFEEEKVVPTHEGKIGPLDFLIVRMVGQGSFGKVFLVRRKKGDDCLEGDGVFAMKVMKKDTIIKKNHVDYMRAERDILTKVVHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGIFSEDQARIYTAEIVSAVSHLHKNGIVHRDLKPENILMDADGHVMLTDFGLSKEIDEMGRSNSMCGTTEYMAPEILLGKGHNKNADWWSVGILLYEMLSGKPPYTHTNRKKLQEKIIHEKFKLPPFLTSEAHSLLKGLLLKDPSTRFGSGLNGDEQIKSHKWFRSINWKKLEARELQPKFKPDVFGKECTANFDQCWTEMPPNDSPASTPTAGDHFQGYTYVAPNPWLPSG* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1387 449 Gene3D Phosphorylase Kinase; domain 1 118 424 - -
Lan1g1387 449 Pfam Protein kinase C terminal domain 404 439 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lan1g1387 449 Pfam Protein kinase domain 122 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1387 449 SMART pkinase_C_6 382 441 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lan1g1387 449 ProSitePatterns Protein kinases ATP-binding region signature. 125 154 IPR017441 GO:0005524
Lan1g1387 449 MobiDBLite consensus disorder prediction 21 54 - -
Lan1g1387 449 Gene3D Transferase(Phosphotransferase) domain 1 205 400 - -
Lan1g1387 449 SMART serkin_6 119 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1387 449 MobiDBLite consensus disorder prediction 21 37 - -
Lan1g1387 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Lan1g1387 449 PANTHER RIBOSOMAL PROTEIN S6 KINASE 8 446 - -
Lan1g1387 449 ProSiteProfiles AGC-kinase C-terminal domain profile. 382 449 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lan1g1387 449 SUPERFAMILY Protein kinase-like (PK-like) 118 440 IPR011009 -
Lan1g1387 449 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 8 446 - -
Lan1g1387 449 ProSiteProfiles Protein kinase domain profile. 119 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1387 Lan-Chr1 23582728 23589933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1387 19 442 AGC Kinase Gene Family AT3G08720 55.804 9.57e-176 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Lan1g1387 Pkinase 2.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1387 K04688 - jre:108999208 644.039