Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1384 ATGACCCTTAAGGGTGGCACAACGCAAGCCTGCGCCGCGTGCAAATACCAGAGAAGAAAGTGCACTTCTGAGTGCCTTCTTGCTCCATATTTCCCTGCAGACCAACCCAAAGTGTTTCTCAATGTTCACAAACTTTTTGGAGTAAGTAACATTGTAAAGATATTAAAGATCCTCGAGCCGAATCAGAAGAAAATAGCCATGGATTCTATCATTATACAAGCAAATTACAGGGATAAGTACCCTGTGCATGGTTGTTGGGAAGAAATTTGCAGGCTGCAACACCAAATATGGTTGGCAGAAGATGAACTTCAAACTGTTTATCAACAACTTGAGATGTTTAGACAACAAAACCAGCAACAACAACAAGGTCTAACAATGCCTGATTATATGAATGTGGCATCACAATTGGAGTTGGGAATTGCGGCGCCGTGTACTAATGCCCTGACACTTTTCAATCATAGTCCACAAGGACAAACTTATAGTAACACAATGGCTGCGGCTGCGGCTGTGGCTGCGGCTGCAGCTTTGCCTGTTTCGCAACAACATTCCTACTCTAACAGCAACAGTGTGGATTATAATAATTCCCCTTACTTGGAATCCAATGATGACACCAACATGTGGATTCAGCAACATCATCATTATGCAAATAATAATAGCAATCCTATTGTAATGCAATCTCAGATGCTTACCTCTGAGGCACTTGCAATCCAACAAGAAACTGTTGAAGATTATGAAGAGATGCATCCACTTTTTGATGCAATTGATGATAGGCAATCATATATTTACTCCAAGGAAGCTTATGAGTCAAGTTCAGAAGAATCGCTGAAAGATACGAGGAAGTTCACTGAGCATGTTGCTGAGAATGAATTGAAGAATGCTGCTGCATGTTTCAGCCTTACCAGTGTCAATTGA 912 0.4134 MTLKGGTTQACAACKYQRRKCTSECLLAPYFPADQPKVFLNVHKLFGVSNIVKILKILEPNQKKIAMDSIIIQANYRDKYPVHGCWEEICRLQHQIWLAEDELQTVYQQLEMFRQQNQQQQQGLTMPDYMNVASQLELGIAAPCTNALTLFNHSPQGQTYSNTMAAAAAVAAAAALPVSQQHSYSNSNSVDYNNSPYLESNDDTNMWIQQHHHYANNNSNPIVMQSQMLTSEALAIQQETVEDYEEMHPLFDAIDDRQSYIYSKEAYESSSEESLKDTRKFTEHVAENELKNAAACFSLTSVN* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1384 303 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Lan1g1384 303 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 276 - -
Lan1g1384 303 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 4 276 - -
Lan1g1384 303 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1384 Lan-Chr1 23567840 23569074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1384 1 266 AS2 family AT3G47870 36.570 3.87e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan1g1384 LOB 4.9e-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0867 12 15752005 15753509 Lan1g1384 1 23567840 23569074 LSH
Lan1g1384 1 23567840 23569074 Lan1g1994 1 35121359 35123032 LSH