Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1383 ATGGGGAACAAAAAGCGAAACCCTCCGCGTTCGAAACATTCTCCGGCGGCTTCTCCGGTGACGCAATCTGCCATCGGCGGAGCCGCCGATGTGTCACCGGACTCCGACTCATGCATGGTGGTTTCTGATCTCGCACTCCATAACCCTAGCAACAAGGTTGAATTGCCCCTTCGCACTGAGGGTTCCGTTTACAGTTCAATCAAGGTCGAATGTGACAAAGCTCTAAACGCGTTTCGGCGTGGTAATCACAACAGAGCGCTTAAGATGATGAAGGATTTGTGTTCCAAATACGAGGGTTCGGTTTATGCTGGGTTCACTCAGCGAGTTCAGGGATTTGTGTTGTATAAGGTTTCGTCGATTATGAATGACCCGGCTGTGAAACAGAGGCACTTGAAGAATGCTGTTGATTCGGCGCGGAAAGCGACTGAGCTTTCACCGAATTCGATTGAGTTTTCTATGTTTTATGGTAATTTGTTGTTGGAGGCTGCGACGGAGTCGAAGGATTATGAGGATGTGGTGCAGGAGTGTGAGAGGGCGCTTGCTGTTGAGAACCCTAACGATCCGGCGAAGGAGAGTTTGCAGGATGAGAGTGAGCACAAGTCTTCCACTGAGGAGTCGCGGATAGCACATGTGCAGAATGAGTTGAGGCAGCTGATTCAGAAGTCGAATATAGCATCGTTATCGACTTGGATGAAGACTTTGGGTAATGGTGAGGAGAGGTTTAGGTTGATTCCGATAAGGAGGCCCGCGGAGGATCCAATGGAGATGAGGCTGGTTCAGAACAGAAGGCCAAATGAGATTAAGAAGGTTTCTAAGACGCCCGAAGAAAGGAGAAAAGAAATTGAAGTTCGAGTGGCTGCTGCGAGGCTGTTGCAGCAGAAGTCCGAGTCACCACAATTTCCGAATGAAGCAGACAGGGAGGAGAGGGAGTTGGATTTGGCTTCGGTATCTGGCCATAGAATTGGTGATAGGCGTGGTAAGTATGGGAATGCGAGAAAGAATGGGTCCACTGATGAAAGGAGGAATTGGGTGCACTCATATTGGAACTCATTAAGCATGGAAATGAAGAAGGAGTTGCTTAGGATTAGAATTAGTGATCTCAAGTCGCATTTTGGGTTGTCAAAGGATACTTTGCCTATAGACATTTTATCAGAAGCCTTGTCCTATGTTGAGTTCAGTAAAACATGGAAAGTCTGGCTTTGCAGTGAGTGTGACGAGAAACATTCCAATCCAGAATCTCACAGGCAGCATGTTATGCAGGAACACATGCGAAATCTCTTGCCGAAAATGCAGAGACTTTTGCCCCAAAATGTTGACAATGAATGGATTGAGATGATTCTTAATTCTTCTTGGAAGCCTCTGGATGTCTCAGCTGCAATTAGAATGCTTGGCAATAAATCAAAATTCATGGTTTCTCCGTTCACCGAGGATTCATACTTCGGGCCCCATACTCATAAATATGCTCATACTCAGAACTTCAATGATTGCTTTAAAGATGCAAGTGATTCTTACCATGAGAAGGAAAACTTGAGGTATGATCTTGATACTGGTACAATAAAAGTCAGTGACTATTGTGAAATTACAGGAGGTAATGTTACAGAAGGTCTTGAAGATCAAGGATCTATAACATACCCTTGTGCAGATAATTGGCCAGTATCTGATGACTCAGAGCGTGCCAAACTTTTGGAGAAAGTTCATGCATTATTTGAAATGCTTATCAGGCACAAATTTCTTGCTGCTACTCATCTGAACAAGGTCATACAATTTACCATGGGTGAGATACAGGGTCTTTCTGCTGGTTCTCAACTTGTAAACCGTGGTGTTGATAAAACACCTATGTGCATATGCTTTTTGGGAGCCTCACAGCTCAAGAAAATTCTCCAATTTCTGCAGGAGCTTTCTCAGGCTTGTGGATTGGGTAGATATCCTGACAAAACTAATGGTCCCGTGAATGATTCACACAGTATCAGTCAAGTTCCTGAGATCAAAGAGCAGATTGTTCTTAATGGAGATTCGTCATGCCTTCTTCTGGATGAGTGTTTACTGCCAACACAAGTCACTCCTGGCACAGCCCAGGGGTTTGTCTTGGATGATGTTACTTCCCCAGGTTCTCCAGATGGGATTTCAAGCAATAAGGATGCTTTCCTATCCTGGATATTTTCAAGTTCACCCATAGGAGATCAATTGACATCATGGATTCGGACTAAAGAAGATAAAAAGAATCAAGGAAAGGAAATTGTTGAGATGCTTGAGAAGGAGTTTTTACAACTACAGGGCCTCTGTGAGAAGAAGTTTGGGCGTATAAGTTATGAGGAAGCACTGCAGACAGTAGAGAATCTGTGTCTTGAAGAAGGTAAAAAGAGGGAACATGGTGGTGAATTTGTCCAACGTAGCTATGAGTCTCTTTTAAGAAAGCGAAGAGAAGAGCTCACTGAGACTGAGAATGATGTGGCATATGTAAGCAATAGGTTTGAGTTGGATGCTATATCAAATGTTCTTCAAGAAGCAGAAGCTATGAATGTTAACCAATTTGGTTATGAGGAAACTTATGCGGGTGTGAATTCTCAATTATGTGACTTGGAATCTGGTGAAGATGAATGGAGAATGAAGGACTACTTGCATCAAATGGATGGTTGTATAGAAATTGCTATTCAGAAACTCAAAGAGCACTTATCCATAGAGCTTAGCAAAATTGATGCACGAATCATAAAAAATGTTACAGACATGCAGCAAATGGAACTTAGGCTTGGGCCTATTTCTGCCTATGATTATCGAGCAATATTATTGCCTCTAGTGAAGTCGTACCTAAGGGCAGTTTTGGAAGATTTGGCTGAGAAAGATGCAACAGAGAAGTCTGATGCTGCAAGAGAAGCATTTTTGGCTGAACTTGCTCTTGATTCCAAGAAGGTTAAAGGGGGAAGTGAGAACACAAAACATTTGGATAAGACTAAAGATAAGAAGAAGAACAAAGATCACAGGAAAACAAGAGATTTTAAGGCTACAAGTGGTAATGAGCAGCTCTTGCTTCGAGATACAATTCCTTATTCCAATCCAGTTGCACCTGACAGTGACTTTCAAGATGTGGTTGTTACTGTGAATGGTGATGACTTGGAACAACAGGAAGATGAATTTAAACGTAAAATTGAACTAGAAGAGGAGGAGAAAAAACTTGAAGAAACTCTGGAATTTCAGCGAAGGGTAGAAAATGAAGCTAAACAGAAGCACCTTGCCGAGCAACAAAAGAAATCATCTGGGATCTATTTAGAGGAAGTGGTGGAGAAACTTCAGGATGCCCAATTGGAGGCAGTTGCTGATGGCACAGATGTGCATGAACATTTAAGACCACATACACAGGAGCAATTGGCAAAGGAGAATGGGTTCCCAAGCAATATGGATAGTGTGCTTATCACCCCAGCAAATGGTTCTTTGGGGGAAGCTAAGTCAGCTGATTCAACTTCCCAAAAGATTGGTTATTTGCATCCGACAGAAGTTAAACAAGCAGATCTGCCTAACGGAGTTGTTTCAGAAAATGGTCTTCAGTTGCCTGATAGGCGTCAAGGCAAAAAGCATAGGCGTCATAAGAATTCTTCCAGAACGGCTGATGGGAAGGTTGAACCCGTCTCATCGGAAAAAGAGAATACCGAGAATACAGACATCGACAATCATTTAAGAGAGCAGATTAAATCCCATAACAATCAAGATGCTAGCAATGTGTGGGAAAACAGTGGATCAAATGCATTGAAAGAGTTGAAAATGAAAGATGAGGAGGAGGAAAGATTCCAAGCAGATCTTAAAAGAGCCGTACGGCAAAGTCTGGACACATATCAAGCACGTAGCAAAATGCCTCCAGTTTCCGGTTTAAGAATGTTTGAGAGAGCTTCCTCACAAGTAGATAGTTCTGATTTTGTACCAGAGGGAGTCCCAAGCAAGGATGTGAGTGGAGGAGCTACTTTGCTTGGTTCTGGGCTAAAGAATGAAGTTGGTGAATATAATTGTTTTCTCAATGTTATTATACAGTCATTGTGGCATATAAGACGCTTCCGGGAGGAATTTCTTGGCAGATCAAGGTCAGAGCATGATCATGTGGGTAACCCCTGTGTTGTCTGTGCATTGTATGAAATCTTCACTGCACTGAATCTTGCATCAAAAGATTCAAGGAGAGAAGCAGTTGCTCCTACTTCCCTGCGAATTGCTCTAAGCAACTTATATCCGGATAGTAACTTCTTTCAAGAGGCTCAGATGAATGATGCTTCTGAGGTGCTGGCAGTGATATTTGACTGCCTTCATCGATCTTTTACTCGTGGTTCAAGTGTTTCTGATGCAGAATCAGTGGAAAGCAACTGCATGGGATCTTGGGATTGTGCAAACAGAACTTGTATTGCACATTCACTTTTTGGAATGGACATTTTTGAACAAATGAACTGCTACCATTGTGGTCTTGAATCCAGACATTTGAAGTATACTTCTTTCTTTCACAATATAAATGCCAATGCCCTCCGGACAATGAAGGACATGTGTTCTGAAACCGAAAGCTCCTTTGATGAGCTTTTGAATCTTGTGGAGATGAACCATCAGTTAGCATGTGATCTAGAAGTTGGTGGCTGTAGCAAGCTCAATTACATCCATCACTTTCTTTCAGCCCGACCCCATGTTTTTATGACAGTTCTAGGTTGGCAAAATACATGCGAGAGTGCTGATGATATAAAAGGTACACTGGCAGCCTTGAGCACCGAGTTAGATATCAGTGTCCTTTATCGTGGTCTAGATCCTAAAAGTACCCATAGCTTGGTTTCGATGGTTTGCTACTATGGCCAACATTATCATTGCTTTGCGTATAGCCATGACCGTCAACAATGGATAATGTATGATGACAAGACTGTCAAGATAATTGGTGGATGGGTGGATGTTCTTACCATGTGTGAAAGAGGCCATTTACAACCTCAGGTTCTTTTCTATGAAGCTGTAAACTAG 4971 0.4265 MGNKKRNPPRSKHSPAASPVTQSAIGGAADVSPDSDSCMVVSDLALHNPSNKVELPLRTEGSVYSSIKVECDKALNAFRRGNHNRALKMMKDLCSKYEGSVYAGFTQRVQGFVLYKVSSIMNDPAVKQRHLKNAVDSARKATELSPNSIEFSMFYGNLLLEAATESKDYEDVVQECERALAVENPNDPAKESLQDESEHKSSTEESRIAHVQNELRQLIQKSNIASLSTWMKTLGNGEERFRLIPIRRPAEDPMEMRLVQNRRPNEIKKVSKTPEERRKEIEVRVAAARLLQQKSESPQFPNEADREERELDLASVSGHRIGDRRGKYGNARKNGSTDERRNWVHSYWNSLSMEMKKELLRIRISDLKSHFGLSKDTLPIDILSEALSYVEFSKTWKVWLCSECDEKHSNPESHRQHVMQEHMRNLLPKMQRLLPQNVDNEWIEMILNSSWKPLDVSAAIRMLGNKSKFMVSPFTEDSYFGPHTHKYAHTQNFNDCFKDASDSYHEKENLRYDLDTGTIKVSDYCEITGGNVTEGLEDQGSITYPCADNWPVSDDSERAKLLEKVHALFEMLIRHKFLAATHLNKVIQFTMGEIQGLSAGSQLVNRGVDKTPMCICFLGASQLKKILQFLQELSQACGLGRYPDKTNGPVNDSHSISQVPEIKEQIVLNGDSSCLLLDECLLPTQVTPGTAQGFVLDDVTSPGSPDGISSNKDAFLSWIFSSSPIGDQLTSWIRTKEDKKNQGKEIVEMLEKEFLQLQGLCEKKFGRISYEEALQTVENLCLEEGKKREHGGEFVQRSYESLLRKRREELTETENDVAYVSNRFELDAISNVLQEAEAMNVNQFGYEETYAGVNSQLCDLESGEDEWRMKDYLHQMDGCIEIAIQKLKEHLSIELSKIDARIIKNVTDMQQMELRLGPISAYDYRAILLPLVKSYLRAVLEDLAEKDATEKSDAAREAFLAELALDSKKVKGGSENTKHLDKTKDKKKNKDHRKTRDFKATSGNEQLLLRDTIPYSNPVAPDSDFQDVVVTVNGDDLEQQEDEFKRKIELEEEEKKLEETLEFQRRVENEAKQKHLAEQQKKSSGIYLEEVVEKLQDAQLEAVADGTDVHEHLRPHTQEQLAKENGFPSNMDSVLITPANGSLGEAKSADSTSQKIGYLHPTEVKQADLPNGVVSENGLQLPDRRQGKKHRRHKNSSRTADGKVEPVSSEKENTENTDIDNHLREQIKSHNNQDASNVWENSGSNALKELKMKDEEEERFQADLKRAVRQSLDTYQARSKMPPVSGLRMFERASSQVDSSDFVPEGVPSKDVSGGATLLGSGLKNEVGEYNCFLNVIIQSLWHIRRFREEFLGRSRSEHDHVGNPCVVCALYEIFTALNLASKDSRREAVAPTSLRIALSNLYPDSNFFQEAQMNDASEVLAVIFDCLHRSFTRGSSVSDAESVESNCMGSWDCANRTCIAHSLFGMDIFEQMNCYHCGLESRHLKYTSFFHNINANALRTMKDMCSETESSFDELLNLVEMNHQLACDLEVGGCSKLNYIHHFLSARPHVFMTVLGWQNTCESADDIKGTLAALSTELDISVLYRGLDPKSTHSLVSMVCYYGQHYHCFAYSHDRQQWIMYDDKTVKIIGGWVDVLTMCERGHLQPQVLFYEAVN* 1657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1383 1656 MobiDBLite consensus disorder prediction 181 207 - -
Lan1g1383 1656 Pfam Ubiquitin carboxyl-terminal hydrolase 1330 1652 IPR001394 GO:0004843|GO:0016579
Lan1g1383 1656 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1656 - -
Lan1g1383 1656 Coils Coil 733 753 - -
Lan1g1383 1656 Gene3D Cysteine proteinases 1316 1654 - -
Lan1g1383 1656 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1321 1655 IPR028889 -
Lan1g1383 1656 MobiDBLite consensus disorder prediction 189 207 - -
Lan1g1383 1656 Coils Coil 1034 1074 - -
Lan1g1383 1656 Pfam Protein of unknown function (DUF627) 73 184 IPR006866 -
Lan1g1383 1656 CDD Peptidase_C19 1412 1653 - -
Lan1g1383 1656 PANTHER INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53-LIKE 1 1656 - -
Lan1g1383 1656 Gene3D Tetratricopeptide repeat domain 65 205 IPR011990 GO:0005515
Lan1g1383 1656 SUPERFAMILY Cysteine proteinases 1322 1653 IPR038765 -
Lan1g1383 1656 Pfam Protein of unknown function (DUF629) 344 881 IPR006865 -
Lan1g1383 1656 SUPERFAMILY TPR-like 129 435 IPR011990 GO:0005515
Lan1g1383 1656 MobiDBLite consensus disorder prediction 1 32 - -
Lan1g1383 1656 MobiDBLite consensus disorder prediction 294 316 - -
Lan1g1383 1656 MobiDBLite consensus disorder prediction 1163 1221 - -
Lan1g1383 1656 MobiDBLite consensus disorder prediction 1198 1221 - -
Lan1g1383 1656 MobiDBLite consensus disorder prediction 300 316 - -
Lan1g1383 1656 MobiDBLite consensus disorder prediction 971 1001 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1383 Lan-Chr1 23556378 23565831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1383 67 1653 C2H2 Transcription Factor Family AT3G47890 56.137 0.0 1693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1383 - - adu:107493676 2350.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0868 12 15755107 15765418 Lan1g1383 1 23556378 23565831 LSH
Lan1g1383 1 23556378 23565831 Lan1g1995 1 35124561 35134285 LSH