Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1381 ATGTGTGGTGGTGCTATCATCTCAGATTTTATCGATGTTAACTTGAAGCGTGCTCGCAAATTGACCACAAATGATCTTTGGTCTCACCTTCACGCTTTGTCTAATTACTCCTCATCCTCTTCTTCTTCTTCCTCTTCCATTTCCAAACCCCTACCACCAATTCTCCCTCAATTTCCAAACAACCAAGTTGTGGCATGTGAGAAGAAAGGTGTGGTTGCAGAAAATGGAAGAGTTAAGAGTGATGGCAAGAAGGTTAAGAATGAGAGGGTTCGGAAGAACATATACAGAGGAATAAGACAAAGACCATGGGGAAAATGGGCTGCTGAGATAAGGGACCCACACAAAGGTGTTCGTGTATGGCTTGGCACCTTCAACACCGCCGAAGAAGCTGCTCTTGCTTACGACGCCGCCGCCCAGCGCATCCGTGGAGACAAGGCCAAACTCAACTTCCCTGACCAACCACCCATTCCTAAGAAACCTCGCCTCACTCAGCCAACTGCGCCACCGCTGCCGCCGCCACCAGAGATCCCAAAGGCCCAGAATTATGGACTTGAGCTCCAGGACTCACTCTCAAGCCTGGAATTGTTCCTTGGTTTGGAGCATGAGGAGCCTCAGGCTAAGTCTCAGCTTCTTGGTTTTGAGTGGAACTCCTCCTCTATGGAACCGTGGATGCTAAACGATGTCGTTTCCTGCAAACGATTTTAG 705 0.4894 MCGGAIISDFIDVNLKRARKLTTNDLWSHLHALSNYSSSSSSSSSSISKPLPPILPQFPNNQVVACEKKGVVAENGRVKSDGKKVKNERVRKNIYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFNTAEEAALAYDAAAQRIRGDKAKLNFPDQPPIPKKPRLTQPTAPPLPPPPEIPKAQNYGLELQDSLSSLELFLGLEHEEPQAKSQLLGFEWNSSSMEPWMLNDVVSCKRF* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1381 234 MobiDBLite consensus disorder prediction 153 178 - -
Lan1g1381 234 MobiDBLite consensus disorder prediction 145 180 - -
Lan1g1381 234 PRINTS Ethylene responsive element binding protein signature 95 106 IPR001471 GO:0003700|GO:0006355
Lan1g1381 234 PRINTS Ethylene responsive element binding protein signature 117 133 IPR001471 GO:0003700|GO:0006355
Lan1g1381 234 Pfam AP2 domain 95 143 IPR001471 GO:0003700|GO:0006355
Lan1g1381 234 CDD AP2 94 153 IPR001471 GO:0003700|GO:0006355
Lan1g1381 234 SMART rav1_2 94 157 IPR001471 GO:0003700|GO:0006355
Lan1g1381 234 Gene3D AP2/ERF domain 94 152 IPR036955 GO:0003700|GO:0006355
Lan1g1381 234 ProSiteProfiles AP2/ERF domain profile. 94 151 IPR001471 GO:0003700|GO:0006355
Lan1g1381 234 PANTHER DNA-BINDING DOMAIN 1 172 IPR044808 GO:0003700|GO:0009873
Lan1g1381 234 SUPERFAMILY DNA-binding domain 94 152 IPR016177 GO:0003677
Lan1g1381 234 PANTHER EREBP TRANSCRIPTION FACTOR 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1381 Lan-Chr1 23514377 23515807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1381 1 230 AP2-EREBP Transcription Factor Family AT3G16770 42.642 2.12e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan1g1381 AP2 1.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1381 K09286 - pop:7477223 175.637