Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1378 ATGGGGAAAATGGGACAAGAACCAGAATCTTCCAAGACCCAGTTGGTTTTAGAGATTTGCTCCATTTCCACACGTTCTGTTGTTTGTGTTCATAGACTTGTTTCTTCAAACCCTGCCAAGGCAACTTTTGTTGATTGGTATTGCATTCTTGGGGTGGAAGAAAATGCAGGTGTGAATACCATTCGCAAGAGATACCATAAACTGGCCTTGCAACTTCATCCAGATAAGAATAAACACCCCAAGGCTGAGGTTGCTTTCAAGCTTGTTTCTGAGGCATATATTTGCCTATCTAATGCTACAAAGAGAAAAAAATTTGACTTGGAGAGACACAACAATTTCTGCATTGAGTGCAAAAGAATCCCCTATCCACCCCACAATGGTGTCACCCCTGGCAATTCAAGTGGTTCAGGCTTCAAGGCATGGAATATTATCAGCAGATCAAGATCAAGTAAACTTTGGAGAAATATTAGAGATATGAGAGATAGATTCAAGGAAGAGGCTAAGGTGATAGAGAAATGTTTACAAACAAATTCAATGATATTAAGGAAAGAAGAATCTCCACTCTATAATCCAGTTGAGTATCTACAAAGAAGCAAGTCACTGCATAGATTTGAGAAAGAAACACCCATTTTCAATCCATCAGATTATTTGCACCAAGGCTACCCTCATCTGAGAAGCCATGTTTACAAGAATTCTGCAACATTTTGGTTCTTGCAGACAGAAACTATGCTGCACAATGACAAGGGAGGAGCCAAATATGCCTCCCCTATATTTGAGGTCAAATCAAGGAGAATGTTTACAGGCAAATTTGCTTATGTACCTTCACAATGTTAG 834 0.3945 MGKMGQEPESSKTQLVLEICSISTRSVVCVHRLVSSNPAKATFVDWYCILGVEENAGVNTIRKRYHKLALQLHPDKNKHPKAEVAFKLVSEAYICLSNATKRKKFDLERHNNFCIECKRIPYPPHNGVTPGNSSGSGFKAWNIISRSRSSKLWRNIRDMRDRFKEEAKVIEKCLQTNSMILRKEESPLYNPVEYLQRSKSLHRFEKETPIFNPSDYLHQGYPHLRSHVYKNSATFWFLQTETMLHNDKGGAKYASPIFEVKSRRMFTGKFAYVPSQC* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1378 277 ProSiteProfiles dnaJ domain profile. 45 109 IPR001623 -
Lan1g1378 277 Gene3D DnaJ domain 44 169 IPR036869 -
Lan1g1378 277 SMART dnaj_3 44 101 IPR001623 -
Lan1g1378 277 Pfam DnaJ domain 45 106 IPR001623 -
Lan1g1378 277 SUPERFAMILY Chaperone J-domain 35 112 IPR036869 -
Lan1g1378 277 PRINTS DnaJ domain signature 47 65 IPR001623 -
Lan1g1378 277 PRINTS DnaJ domain signature 65 80 IPR001623 -
Lan1g1378 277 PRINTS DnaJ domain signature 81 101 IPR001623 -
Lan1g1378 277 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 8 197 - -
Lan1g1378 277 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 202 264 - -
Lan1g1378 277 CDD DnaJ 45 98 IPR001623 -
Lan1g1378 277 PANTHER BNAC03G44070D PROTEIN 8 197 - -
Lan1g1378 277 PANTHER BNAC03G44070D PROTEIN 202 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1378 Lan-Chr1 23486121 23487681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1378 27 106 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 40.698 7.54e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1378 - - gmx:100801809 416.387