Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1360 ATGATTCTTAGCAACGGCCAACGGTCAAGTTCCGGCGACGATGACCATTTTCCGGCGGGTCTTCGGGTTATGGTGGTGGATGATGATCCCACGTGTCTAATGATTCTTGAGAAGATGCTACGTACTTGTCTCTATCAAGTTACTAAGTGCAACCAAGCAGAGATTGCACTTACACTTCTAAGGGAGAATAGGAATGGTTTTGACATTGTTATTAGTGATGTTCATATGCCAGACATGGATGGATTTAAGCTTTTAGAGCACATTGGGTTGGAAATGGACCTTCCTGTTATCATGATGTCGGCGGATGATAGTAAAAATGCTGTTATGAAGGGTGTAACACATGGTGCCTGTGATTACCTCATTAAACCTGTTCAGATTGATTCTGTGAAGAATGTGTGGCAACATGTCGTTCCGAAGAAAAAGAATGAGTGGAGAGACGGTGAGCAATCGGGTAGTGCTGAAGAAGGCAGTTGGAGGAGTTCAAAGAAGAAGAGGGATGAGGATGAGGATGCAGACGAGAGAGATGACACATCCGCGCTAAAGAAGCCACGGGTGGTTTGGTCTGTTGAGCTCCATCAACAGTTTGTGGCTGCTGTGGAACAATTGGGAATTGATAAGGCTGTTCCGAAAAAAATTCTGGAATTGATGAATGTTCCTGGGCTCACTAGAGAAAATGTAGCCAGCCATCTCCAGAAATACCGTCTGTATCTAAGAAGGGTTAGTGGAGTTTCTCAGCACCCGAACAACTCCTTCCTCAACCAACAAAATGCAGCTTTCGGGTCAATATCTTCAATTAATGATCTTCAAACTCTAGCAGTTTCTGGGCAGCTCCCTGCACAAAGTCTAGCCACACTTCAAGCAGCAGGACTTGGTAGATCAACTGCAAAAGCGGGCGTACCTATGCCTCTCATGGATCAAAGAAACCTTTTCAACTTTGAAAACCAAAGGTTAAGAATTGGAGAAGGGCAACAACATCATTTGAGCAGTAGTAAATCAATAGACTTACTTCATGGAATCCCTACCAACATGGAGCCAAAGCAGCTTGCCGATTTGCACCAATCAACCCTATCTATTCGCAACTTGAATATGGGAGTCAATGCTTCTACTACACAGAGCAACCCCTTATTGATGCAGATGGTACAATCACAACCTAGAGGTCAGGTGCTAAGTGAAAATACTGGTCTTTATCCCAGACTATCATCATCTTTAGCGCAGCCGAGTAGGAATGGAATTTTTAATGGCCCTATTAGTATAAACGGTACTGCTAATAGCAACAGAGCACCTGCACAAAAGTCTCCAATGTTGAGTTTTCCTATGAATCAAACCCATGAAATGTCTGTCATTAGTTTCCCTCTTGTAAGCACTCCAGGTATATCTAGTGTCACTACAAAAGGCTCCTTTCAAGAGGAAGTTACTTCCGGAATCAGAAGAGATGGTGGATTTGTTCCAAGTTATGATATTTTTAATGAGCTGCACCATTACAAGTCCAATGAGTGGGGAATAACAACCCCTGGCCTCACTAATACTTCCTCTCAACCTTCAAATCCATTCCAAGGTAACATCCATGCCTCACCATCAAGTTTCGTTCAACACGGATTTTATTCTACCCAACAGACTAGACAATGTAGAGATTCCCCTTTGATGGACAAAGCCTTCTTCTGTCTAGGAGAAGGCTTGGAACAAGGTAATCTCTACAATGCCGATCAACACTTTAACAAGCTTGCTGATAATTCAGAGAGGGTTAAGGTTGAAAGAATTCCCGATGAAAGCTCTCAGACTAATCTCTTTGCGGAGAATTATGCGCAGGAGGATCTTCTTAGTGCGCTTCTGAAACAGCAAGAAGGGATTGGACCAGTAGAGAATGAGTATGATTTTGATGGATATTCTCTGGACAATGTTCCTGTCTAA 1908 0.4308 MILSNGQRSSSGDDDHFPAGLRVMVVDDDPTCLMILEKMLRTCLYQVTKCNQAEIALTLLRENRNGFDIVISDVHMPDMDGFKLLEHIGLEMDLPVIMMSADDSKNAVMKGVTHGACDYLIKPVQIDSVKNVWQHVVPKKKNEWRDGEQSGSAEEGSWRSSKKKRDEDEDADERDDTSALKKPRVVWSVELHQQFVAAVEQLGIDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRVSGVSQHPNNSFLNQQNAAFGSISSINDLQTLAVSGQLPAQSLATLQAAGLGRSTAKAGVPMPLMDQRNLFNFENQRLRIGEGQQHHLSSSKSIDLLHGIPTNMEPKQLADLHQSTLSIRNLNMGVNASTTQSNPLLMQMVQSQPRGQVLSENTGLYPRLSSSLAQPSRNGIFNGPISINGTANSNRAPAQKSPMLSFPMNQTHEMSVISFPLVSTPGISSVTTKGSFQEEVTSGIRRDGGFVPSYDIFNELHHYKSNEWGITTPGLTNTSSQPSNPFQGNIHASPSSFVQHGFYSTQQTRQCRDSPLMDKAFFCLGEGLEQGNLYNADQHFNKLADNSERVKVERIPDESSQTNLFAENYAQEDLLSALLKQQEGIGPVENEYDFDGYSLDNVPV* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1360 635 CDD REC_typeB_ARR-like 23 137 - -
Lan1g1360 635 MobiDBLite consensus disorder prediction 143 178 - -
Lan1g1360 635 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 181 238 IPR017930 -
Lan1g1360 635 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 149 - -
Lan1g1360 635 PANTHER TWO-COMPONENT RESPONSE REGULATOR 146 607 - -
Lan1g1360 635 SUPERFAMILY CheY-like 20 140 IPR011006 -
Lan1g1360 635 Pfam Response regulator receiver domain 23 130 IPR001789 GO:0000160
Lan1g1360 635 Gene3D - 21 154 - -
Lan1g1360 635 Gene3D - 179 241 - -
Lan1g1360 635 ProSiteProfiles Response regulatory domain profile. 22 137 IPR001789 GO:0000160
Lan1g1360 635 PIRSF RR_ARR_type-B 3 627 IPR017053 GO:0003677|GO:0003700|GO:0009736
Lan1g1360 635 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 182 235 IPR006447 GO:0003677
Lan1g1360 635 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 149 IPR045279 GO:0009736
Lan1g1360 635 PANTHER TWO-COMPONENT RESPONSE REGULATOR 146 607 IPR045279 GO:0009736
Lan1g1360 635 SUPERFAMILY Homeodomain-like 180 239 IPR009057 -
Lan1g1360 635 SMART REC_2 21 133 IPR001789 GO:0000160
Lan1g1360 635 Pfam Myb-like DNA-binding domain 184 234 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1360 Lan-Chr1 23308166 23311928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1360 55 635 Response Regulator Gene Family AT3G16857 46.024 2.03e-156 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Lan1g1360 Response_reg 4.2e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1360 - K14491 lang:109356888 1249.96