LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan1g1351	ATGAAATATAACACACCACAATACATGTTTCCCTTCATTATATTCTCATTATTACTCTTAACTACAACCACAAATTCTGCACCAGCTTCTGATTCTTTCATAATTTCATGTGGTTCTTCCTCTGATGAAACTGATTCTAATGGAAGAACTTGGTCATCAGATTCTAAATATCTTACACCCTCTTCTCATGATTCAACAATCTCCATAGCTAAATATCAAGACCCTTCTCTTCCTTCACAAATACCTTACATGACAGCAAGGATTTTCACTTCTATATCTACATACCAATTCAATGTTTCATCAAACCAACGTTTCTTTCTTAGGCTCCATTTTTACCCTTCTACTTATTCTCCTCTTGATCCAAAAAATGCATACTTTAACGTTGTTGCAAATGAGTTCACACTCCTCCATAATTTCAGTGCTTTCATTACAGCAAAAGCTTTGACACAAGCCTATTTTATTAGTGAATTCTGTATTGTAACTTCTCAATCAAGTAAACTAAACATCACGTTCATACCTTATTCACCAACATCATCATATGCTTTCATCAATGGCATTGAGATTATTCCTATGCCTGATCACATGTTTCAGACAGCAACATTGATTGACACAGACCAATCTTTTGAGGTTGGAAATAACTCATTGCAGACCATGTTTCGGTTAAATGTTGGTGGACAAAGCATTGCACCAAACAAAGACTCTGGTCTTAGTAGAACATGGTACGATGATTCGCGCTATTTGTTTGGTGCAGCAGCTGGTGTAACTTTTACATCTGATAAGAATGTTAAAATTGAATACCCTTCTAGCATGAATGAAAAAATTGCCCCTTTAGATGTTTATAGCACTGCAAGGACAATGGGGCCGAATGCTACCGTGAATCTCAATTACAACCTTAGTTGGGTGTTTCAGGTTGATGCTAATTTTACATATGTTGTGAGGTTCCATTTTTGTGAGCTGGAATTGACCAAAATTAACCAGAGAGTGTTTGATATTTATATTAACAATCAAACTGCACAAGAATCTGCTGATGTTATTGCTTGGTCCGGATCGGAAGGTGTTCCTTTTTATAAAGACTTTGCTACTTATGTCATGGATGGACCTGGTGATGAAGAATTGTGGGTGGAATTACACCCTTCAGTGTCATCAAAGCCAGAGTATTATGATGCAATTCTCAATGGATTGGAGATATTTAAGGTCAATGATAGTGATGGAAACTTGGCAGGGCCTAATCCTACGCCGTCGCATTTGCTTCTTGATGCAGAAAGGAGGGAAGGTAAGAAACTTAGCACATCGAAACATGATTGTGATAAAGCAATAGGAGGGGCTGTTGGTGCTGGATTTGTTGTTATTGTTGCTGTTTGCATCTTTGTTGTGTATAGGAAAAAGAAAAGAAATGGTTTTGCGAATGACTCTGTTCTTGGTAATTGGATTCCTCTATGTGGATCTTCTCATAAGCCAACAACAGTTTCTGATAAGAGTAGTGGTGGTAGTAGTAATCTTTCAAGTTTAACACAAGGTTTATGCCAGCATTTTTCATTAGCTGGGATTAAACATGTTACACAGAACTTTGATGAATCACAGGTCATTGGTGTTGGTGGGTTTGGTAAGGTTTATAAAGGTTGTATAGATGGAGGAACCAAAGTAGCTATTAAAAGATCTAATCCATCTTCAAATCAAGGAGTTACAGAGTTTCAGACAGAAATTGTCATGCTTTCCAAGCTAAGGCACCAACATTTAGTCTCTTTAATTGGTTTTTGCGAAGAAAACGGTGAAATGATTTTGGTGTATGATTACATGGCTAATGGAACTCTTCGCGAACACCTTTACAAGAGCGACAACCCAGATTTATCATGGAAGCAAAGGCTGAAAATATGCATTGGAGCTGCTAAGGGGCTTCACTACCTTCACACTGGTGCCAAGAACACAATCATTCACCGCGACGTGAAAACAACAAACATCCTATTAGATGAAAGTTGGGTAGCAAAAGTGTCTGATTTTGGGTTGTCAAAATCTGGTACCAATTTAAACCAAACCCATGTGACCACAATGGTGAAAGGCAGTTTCGGTTACTTAGATCCCGAGTACTTTCGCAGGCAACAACTAACAGAAAAATCTGATGTTTACTCTTTTGGTGTAGTCCTTTTTGAGGTCTTATGTGCTAGGCCAGCACTTGATCCGAGTTTGCCTAAAGAACAAGTTAGCTTAGCAGACTGGGCTTTACTGAACCTAAGGAAGGGAACTCTTGAAGATATTATTGACCCTTTTCTTAAAGGCAAAATAAACCATGAGTCTTTGAAGAAGTTTGTAGAGACTGCTGAGAAGTGCATAGCTGATAATGGCCTCGAACGCCCTTCGATGGGTGATGTGCTATGGAAACTCGACTTCACACTTCAGTTGCAAGAGGCTCCTGATGGAGCGAAACATGCTTCGCCTAAGGCCACATGGGATACTGAGGAGGGGACTATATATAGCGGTAGCGAGCTTGATGACTCAAATTCTAGTGCAATCTTTTCACAAATGGAGAGCCAAAGTGGAAGATAG	2541	0.3888	MKYNTPQYMFPFIIFSLLLLTTTTNSAPASDSFIISCGSSSDETDSNGRTWSSDSKYLTPSSHDSTISIAKYQDPSLPSQIPYMTARIFTSISTYQFNVSSNQRFFLRLHFYPSTYSPLDPKNAYFNVVANEFTLLHNFSAFITAKALTQAYFISEFCIVTSQSSKLNITFIPYSPTSSYAFINGIEIIPMPDHMFQTATLIDTDQSFEVGNNSLQTMFRLNVGGQSIAPNKDSGLSRTWYDDSRYLFGAAAGVTFTSDKNVKIEYPSSMNEKIAPLDVYSTARTMGPNATVNLNYNLSWVFQVDANFTYVVRFHFCELELTKINQRVFDIYINNQTAQESADVIAWSGSEGVPFYKDFATYVMDGPGDEELWVELHPSVSSKPEYYDAILNGLEIFKVNDSDGNLAGPNPTPSHLLLDAERREGKKLSTSKHDCDKAIGGAVGAGFVVIVAVCIFVVYRKKKRNGFANDSVLGNWIPLCGSSHKPTTVSDKSSGGSSNLSSLTQGLCQHFSLAGIKHVTQNFDESQVIGVGGFGKVYKGCIDGGTKVAIKRSNPSSNQGVTEFQTEIVMLSKLRHQHLVSLIGFCEENGEMILVYDYMANGTLREHLYKSDNPDLSWKQRLKICIGAAKGLHYLHTGAKNTIIHRDVKTTNILLDESWVAKVSDFGLSKSGTNLNQTHVTTMVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALDPSLPKEQVSLADWALLNLRKGTLEDIIDPFLKGKINHESLKKFVETAEKCIADNGLERPSMGDVLWKLDFTLQLQEAPDGAKHASPKATWDTEEGTIYSGSELDDSNSSAIFSQMESQSGR*	847

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan1g1351	846	MobiDBLite	consensus disorder prediction	817	846	-	-
	Lan1g1351	846	Gene3D	Transferase(Phosphotransferase) domain 1	599	812	-	-
	Lan1g1351	846	MobiDBLite	consensus disorder prediction	804	846	-	-
	Lan1g1351	846	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	643	655	IPR008271	GO:0004672\|GO:0006468
	Lan1g1351	846	CDD	STKc_IRAK	529	794	-	-
	Lan1g1351	846	PIRSF	SRK	30	145	IPR024171	GO:0004674
	Lan1g1351	846	PIRSF	SRK	397	843	IPR024171	GO:0004674
	Lan1g1351	846	ProSiteProfiles	Protein kinase domain profile.	523	796	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan1g1351	846	Pfam	Protein tyrosine and serine/threonine kinase	526	722	IPR001245	GO:0004672\|GO:0006468
	Lan1g1351	846	Gene3D	-	32	191	-	-
	Lan1g1351	846	Gene3D	-	214	401	-	-
	Lan1g1351	846	SUPERFAMILY	Protein kinase-like (PK-like)	498	795	IPR011009	-
	Lan1g1351	846	PANTHER	OS07G0166700 PROTEIN	23	820	IPR045272	GO:0004714\|GO:0006468
	Lan1g1351	846	Gene3D	Phosphorylase Kinase; domain 1	484	598	-	-
	Lan1g1351	846	Pfam	Malectin-like domain	35	399	IPR024788	-
	Lan1g1351	846	SMART	serkin_6	523	796	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lan1g1351	846	PANTHER	RECEPTOR-LIKE PROTEIN KINASE ANXUR2	23	820	-	-
	Lan1g1351	846	ProSitePatterns	Protein kinases ATP-binding region signature.	529	551	IPR017441	GO:0005524
	Lan1g1351	846	MobiDBLite	consensus disorder prediction	38	57	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan1g1351	Lan-Chr1	23188593	23209882	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan1g1351	30	804	Receptor kinase-like Gene Family	AT3G51550	58.564	0.0	907

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Lan1g1351		Malectin_like	3.6e-50	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan1g1351	-		-	cpap:110821217	1072