Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1347 ATGGGTTGCTTTGGCTTTTGTAAAGGAGATGATAGTTATACACCTCCAGACAATGGACACTTCATGCCACCCAATCCTACCGGGAACATTGGTTATCATGGCAGACACGCTGCAATAGCGGCTCCTCAGACTACAAATTTTCAACCTATTGCTGTCCCTTCCCTTTCAGTAGATGAATTGAAGTCTGTAACAGATAATTTCGGTTCAAAATATTTCATTGGTGAGGGTGCATATGGGAAAGTATATCGTGCCGTTTTAAAAAATGGGCGTGTTGTGGCAATTAAAAAGTTAGATTCCAGTATACAACCAGACCAAGAATTTCTTGCTCAGGTATCCACTGTATCAAGGCTAAAACATGAGAATGTTCTTGAGCTTGTTAGTTATTGTGTCGATGGTCCTTTGCGTGCCCTTGCTTATGAATATGCTCCTAAAGGATCCCTTCATGATATTATACATGGACGCAAAGGTGTGAAGGGTGCACAGCCTGGTGCAGTTCTCTCATGGGCTCAGAGAGTTAAAATTGCTGTTGGAGCGGCCGCAGGACTCGAATATCTACACGAGAAGGCAGAGATTCATATTATCCATCGTTACATCAGGTCTAGCAATATACTGCTCTTCGATAACGATGTTGCAAAGATTTCTGATTTTGATCTGTCCAATCAAGCCCCCGATGCAGCAGCTCGTCTGCATTCTACCCGTGTTCTAGGAACCTTTGGTTATCATGCTCCAGAATATGCAATGACTGGACAACTCACTTCAAAAAGTGATGTATACAGCTTTGGAGTTATACTGCTAGAGCTCTTAACCGGACGTAAACCCGTCGATCATACACTGCCCCGAGGACAGCAAAGCCTTGTGACCTGGGCAACGCCGAAGCTTAGCGAGGATAAGGTGAAACTGTGTGTTGATGTTAGATTAAATGGAGACTACCCTTTAAAGGCAGCTGCAAAGATGGCTGCTGTTGCTGCATTATGTGTGCAATATGAAGCTGAATTTCGACCGAATATGAGTATAGTAGTGAAAGCTCTTCAGCCATTACTAAATACTCGTTCTGTTCATCCAAAGGAAGCACCAAAATTGTAA 1083 0.4321 MGCFGFCKGDDSYTPPDNGHFMPPNPTGNIGYHGRHAAIAAPQTTNFQPIAVPSLSVDELKSVTDNFGSKYFIGEGAYGKVYRAVLKNGRVVAIKKLDSSIQPDQEFLAQVSTVSRLKHENVLELVSYCVDGPLRALAYEYAPKGSLHDIIHGRKGVKGAQPGAVLSWAQRVKIAVGAAAGLEYLHEKAEIHIIHRYIRSSNILLFDNDVAKISDFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQLTSKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKLCVDVRLNGDYPLKAAAKMAAVAALCVQYEAEFRPNMSIVVKALQPLLNTRSVHPKEAPKL* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1347 360 ProSiteProfiles Protein kinase domain profile. 67 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1347 360 Gene3D Transferase(Phosphotransferase) domain 1 143 357 - -
Lan1g1347 360 Pfam Protein tyrosine and serine/threonine kinase 73 343 IPR001245 GO:0004672|GO:0006468
Lan1g1347 360 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 356 - -
Lan1g1347 360 Gene3D Phosphorylase Kinase; domain 1 33 141 - -
Lan1g1347 360 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 356 - -
Lan1g1347 360 SUPERFAMILY Protein kinase-like (PK-like) 46 343 IPR011009 -
Lan1g1347 360 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1347 Lan-Chr1 23159204 23167502 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1347 48 349 Receptor kinase-like Gene Family AT4G02010 48.101 6.28e-86 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lan1g1347 PK_Tyr_Ser-Thr 3.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1347 K13436 - gmx:547596 639.417