Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1345 ATGGTATCTGATCTGAATTCAGGGTTGTCCAAGAAAACTTCTGTTTTTGGGTTAAAAGCATGGGAACTAATGGGGTTAATGGTTGGAATGTTCATCATAGTCATTCTTGTGGTCGTATCAATATGCCTTTCAAGAAAGAAATCCAAAAGAGTCAATGGCATGCTTCCCCTAAGACAAATGTTATCTTTCACAGAAGAGATCAAAGAGATTGGAGTTGATCAAGGTTCATCAAATAATCATCCTCAAAATGGCGCTTTTGCGAGTCTGTATGACAAACTTAGTGACAGGGAATCTGAAAAGGTTTCCATTCTAGCAAAAACTGGGGATAATAGCAGTCAATCAGGTTCATTTGTTCATGTTGAGAAAGATGCCGCTGGCTCTCAATCTGGTGAAGAGAGTGGTGTGAAGTCTCTTTATAGGTCTTCTTCGAATCCTATAACCGCACAATCCCCTTTGTCCGGTCTTCCTGAATTGTCTCAGCTTGGCTGGGGGCACTGGTTTACATTAAGGGACCTAGAAGTCGCAACAAACAGGTTTTCGAAAGACAATATTATCGGTGAAGGTGGATATGGAGTTGTTTATCGAGGTCAGCTAGTCAACGGAAGTCCTGTAGCTGTTAAGAAGCTCCTTAATAATCTAGGACAAGCCGAAAAGGAATTTAGGGTGGAAGTTGAGGCTATTGGTCATGTGCGGCATAAGAACTTGGTCAGACTTTTGGGCTATTGCATTGAGGGCACTCACAGGTTGTTGATTTATGAGTATGTTAACAATGGCAATTTAGAGCAATGGCTTCATGGAGCCATGCGGCAGTATGGTTTTCTTACTTGGGATGCTCGGATTAAAATTCTCCTCGGAACAGCTAAAGCCCTGTCTTACTTGCATGAGGCAATTGAGCCTAAAATTGTACATCGAGACATAAAGTCGAGCAATATTCTAATTGATGATGACTTCAATGCCAAAATATCCGACTTTGGGCTGGCTAAGTTACTGGGTGCTGGAAAGAGTCATATCACAACTCAAGTAATGGGCACTTTTGGATACGTGGCTCCGGAATATGCCAATTCTGGCTTTCTCAACGAGAAGAGTGATGTTTATAGTTTTGGAGTATTGCTTGTTGAAGCAATTACTGGAAAAGACCCAGTGGATTATAGCCGACCAACAGCTGAGGTAAATTTGGTTGATTGGCTCAAGATAATGGTCGGGGGTAGGCGTGCAGAAGAGGTGGTTGACACCAACATTGAGACCAGGCCATCAACAAGTTCCCTTAAACGAGCCATTTTGACTGCTTTGAGGTGTGTTGATCCATATTCTGAGAAAAGACCAAAGATGAGTCAAGTTGTTCGTATGCTTCAATCAGAGGAGTATCCAGTTCCTCGAGAGGATCGAAGACGCCGAAAGAGTCAGGCAGAAAGTATAGAGATGAAAGCCCAGAAGGAGACTTCAGATACATATAAGAGTGACAATCCAGAATCCAAGTTCAAAGGCAGAAGGAAGCAAGGGAAGTAG 1506 0.4256 MVSDLNSGLSKKTSVFGLKAWELMGLMVGMFIIVILVVVSICLSRKKSKRVNGMLPLRQMLSFTEEIKEIGVDQGSSNNHPQNGAFASLYDKLSDRESEKVSILAKTGDNSSQSGSFVHVEKDAAGSQSGEESGVKSLYRSSSNPITAQSPLSGLPELSQLGWGHWFTLRDLEVATNRFSKDNIIGEGGYGVVYRGQLVNGSPVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLIYEYVNNGNLEQWLHGAMRQYGFLTWDARIKILLGTAKALSYLHEAIEPKIVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHITTQVMGTFGYVAPEYANSGFLNEKSDVYSFGVLLVEAITGKDPVDYSRPTAEVNLVDWLKIMVGGRRAEEVVDTNIETRPSTSSLKRAILTALRCVDPYSEKRPKMSQVVRMLQSEEYPVPREDRRRRKSQAESIEMKAQKETSDTYKSDNPESKFKGRRKQGK* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1345 501 MobiDBLite consensus disorder prediction 453 501 - -
Lan1g1345 501 Gene3D Phosphorylase Kinase; domain 1 158 254 - -
Lan1g1345 501 MobiDBLite consensus disorder prediction 454 501 - -
Lan1g1345 501 PANTHER OS01G0323000 PROTEIN 2 501 - -
Lan1g1345 501 Pfam Protein kinase domain 180 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1345 501 MobiDBLite consensus disorder prediction 101 142 - -
Lan1g1345 501 SUPERFAMILY Protein kinase-like (PK-like) 163 462 IPR011009 -
Lan1g1345 501 PANTHER RECEPTOR-LIKE KINASE PLANT 2 501 - -
Lan1g1345 501 Gene3D Transferase(Phosphotransferase) domain 1 255 468 - -
Lan1g1345 501 MobiDBLite consensus disorder prediction 104 118 - -
Lan1g1345 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 301 313 IPR008271 GO:0004672|GO:0006468
Lan1g1345 501 SMART serkin_6 179 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1345 501 CDD STKc_IRAK 185 451 - -
Lan1g1345 501 ProSitePatterns Protein kinases ATP-binding region signature. 185 208 IPR017441 GO:0005524
Lan1g1345 501 ProSiteProfiles Protein kinase domain profile. 179 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1345 Lan-Chr1 23151555 23156222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1345 17 453 Trihelix Transcription Factor Family AT1G70460 39.640 3.29e-95 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lan1g1345 Pkinase 9.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1345 - - gmx:100793499 853.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0925 12 16158750 16163968 Lan1g1345 1 23151555 23156222 LSH
Lan1g1345 1 23151555 23156222 Lan15g0217 15 2348721 2352686 PCT
Lan15g0217 15 2348721 2352686 Lan1g1345 1 23151555 23156222 PCT