Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1344 ATGGTGATTATGAACCTTGGTAAGGAAGGAGGACAAAAAATGGGTATTGGGAAATATGAATTGGGTAGGACTCTTGGTGAGGGCAATTTTGGAAAAGTCAAGTTTGCAAGGAACACTGACTCTGGTCAACCTTTTGCTGTTAAGATCCTTGACAAGAATAAGATCATTAATCTCAATACCACTGATCAGATAAAAAGGGAAATAGCAACATTAAAACTTCTCAGGCATCCCAATGTTGTTAGGTTACACGAGGTGTTAGCTAGCAAAACAAAAATTTACATGGTACTTGAGTACGTTACTGGAGGGGAGCTATTTTACAAAATTGCATCCAAGGGAAAACTTACTGAAGTTGAAGGTAGAAAGTTGTTTCAACAGTTGATTGATGGTGTGAGTTACTGCCACAATAAAGGTGTCTTCCACAGGGATCTCAAGCTTGAGAATGTACTTGTGGATGGTAAAGGGAATATAAAGATAAGCGATTTTGGCCTTAGTGCTTTACCTCAACATCTTAGGGAAGATGGACTCTTGCATACAACTTGTGGAAGTCCAAATTATGTTGCACCAGAGATTCTTGCAAATAAGGGCTATGATGGTGCAACATCAGATGCATGGGCATGTGGCGTTATGTTGTATGTTATCTTAACAGGACACCTACCTTTTGATGATAGAAATCTTGCAGTTCTCTACCAAAAGATTTTTAAAGGAGATGTTCAAATACCAAAATGGCTATCATGTGGTGCCCAAAATATGATAAATAGGATTCTTGATCCCAATCCTAAAACAAGGATAACCATGGCCGAGATCAAAGAAGATACATGGTTCAAGGAGGACTATACTCCAACAAATCCCTATGAGGATGAAGATGAGGAAAATATAGATATTGACAATGAAGCATTATCCATTCATGAAGTGCCACATGAAGGAGAAGAGAGGAGTCCAAGATCATCAACCCTAATCAATGCATTTCAGTTAATTGGAATGTCTTCAAGCCTAGACCTTTCTAACTTTTTTGAGAAAGAGGATGTCTCTGAGAGGAAGATAAGATTTACATCAAATCTTTCAGCTAAAGATTTGATCGAGAGAATTGAGGACATTGTGACAGAAATGGGATTTAGCGTCCAAAATAAAAATGGCAAATTGAAAGTGATTCTAGAGAACAACCCACACTATAAAAGTCTACGTTGCCTCTCAGTAGCAACAGAGGTGTTTGAAATAAGTCCATCATTGTATGTAGTAGAATTAAGAAAGTCTTATGGAGATGCTTCAGTATATAGACAGTTATGCAAAAGGTTATCAAATGATTTGGGTGTTCCTTCAAGTCAAACTCTAATAAGTTCAGGCTCAGAAGTGAATTAG 1356 0.3761 MVIMNLGKEGGQKMGIGKYELGRTLGEGNFGKVKFARNTDSGQPFAVKILDKNKIINLNTTDQIKREIATLKLLRHPNVVRLHEVLASKTKIYMVLEYVTGGELFYKIASKGKLTEVEGRKLFQQLIDGVSYCHNKGVFHRDLKLENVLVDGKGNIKISDFGLSALPQHLREDGLLHTTCGSPNYVAPEILANKGYDGATSDAWACGVMLYVILTGHLPFDDRNLAVLYQKIFKGDVQIPKWLSCGAQNMINRILDPNPKTRITMAEIKEDTWFKEDYTPTNPYEDEDEENIDIDNEALSIHEVPHEGEERSPRSSTLINAFQLIGMSSSLDLSNFFEKEDVSERKIRFTSNLSAKDLIERIEDIVTEMGFSVQNKNGKLKVILENNPHYKSLRCLSVATEVFEISPSLYVVELRKSYGDASVYRQLCKRLSNDLGVPSSQTLISSGSEVN* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1344 451 Gene3D Kinase associated domain 1, KA1 314 437 - -
Lan1g1344 451 Gene3D Transferase(Phosphotransferase) domain 1 99 281 - -
Lan1g1344 451 Pfam NAF domain 317 374 IPR004041 GO:0007165
Lan1g1344 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Lan1g1344 451 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 12 445 - -
Lan1g1344 451 ProSiteProfiles NAF domain profile. 314 338 IPR018451 GO:0007165
Lan1g1344 451 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Lan1g1344 451 CDD CIPK_C 320 432 - -
Lan1g1344 451 Gene3D Phosphorylase Kinase; domain 1 11 98 - -
Lan1g1344 451 Pfam Protein kinase domain 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1344 451 SMART serkin_6 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1344 451 ProSiteProfiles Protein kinase domain profile. 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1344 451 PANTHER SERINE/THREONINE KINASE 12 445 - -
Lan1g1344 451 SUPERFAMILY Protein kinase-like (PK-like) 16 288 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1344 Lan-Chr1 23135527 23140526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1344 82 444 CBL-interacting serine-threonine protein kinases AT3G17510 68.595 1.98e-170 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan1g1344 Pkinase 3.7e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1344 K07198 - gmx:100777468 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0929 12 16196361 16202891 Lan1g1344 1 23135527 23140526 LSH
Lan1g1344 1 23135527 23140526 Lan15g0214 15 2317940 2324474 PCT
Lan1g1344 1 23135527 23140526 Lan14g0078 14 1088998 1095379 PCT
Lan15g0214 15 2317940 2324474 Lan1g1344 1 23135527 23140526 PCT
Lan14g0078 14 1088998 1095379 Lan1g1344 1 23135527 23140526 PCT